Browse Mouse Gene Sets

Gene set name:

 
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By first letter:

 

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

By collection:

[about the MSigDB Mouse collections]

  • MH (orthology-mapped hallmark gene sets, 50 gene sets)
  • M1 (positional gene sets, 341 gene sets)
  • M2 (curated gene sets, 2710 gene sets)
    • CGP (chemical and genetic pertubations, 980 gene sets)
    • CP (canonical pathways, 1730 gene sets)
  • M3 (regulatory gene sets, 2047 gene sets)
    • GTRD (GTRD transcription factor targets, 279 gene sets)
    • MIRDB (miRDB microRNA targets, 1768 gene sets)
  • M5 (ontology gene sets, 10678 gene sets)
    • GO (Gene Ontology, 10586 gene sets)
      • GO:BP (GO biological process, 7713 gene sets)
      • GO:CC (GO cellular component, 1028 gene sets)
      • GO:MF (GO molecular function, 1845 gene sets)
    • MPT (Mouse Phenotype Ontology MP Tumor, 92 gene sets)
  • M8 (cell type signature gene sets, 233 gene sets)

Gene sets starting with H

Click on a gene set name to view its gene set page.

H1_6_TARGET_GENES
HALLMARK_ADIPOGENESIS
HALLMARK_ALLOGRAFT_REJECTION
HALLMARK_ANDROGEN_RESPONSE
HALLMARK_ANGIOGENESIS
HALLMARK_APICAL_JUNCTION
HALLMARK_APICAL_SURFACE
HALLMARK_APOPTOSIS
HALLMARK_BILE_ACID_METABOLISM
HALLMARK_CHOLESTEROL_HOMEOSTASIS
HALLMARK_COAGULATION
HALLMARK_COMPLEMENT
HALLMARK_DNA_REPAIR
HALLMARK_E2F_TARGETS
HALLMARK_EPITHELIAL_MESENCHYMAL_TRA
NSITION

HALLMARK_ESTROGEN_RESPONSE_EARLY
HALLMARK_ESTROGEN_RESPONSE_LATE
HALLMARK_FATTY_ACID_METABOLISM
HALLMARK_G2M_CHECKPOINT
HALLMARK_GLYCOLYSIS
HALLMARK_HEDGEHOG_SIGNALING
HALLMARK_HEME_METABOLISM
HALLMARK_HYPOXIA
HALLMARK_IL2_STAT5_SIGNALING
HALLMARK_IL6_JAK_STAT3_SIGNALING
HALLMARK_INFLAMMATORY_RESPONSE
HALLMARK_INTERFERON_ALPHA_RESPONSE
HALLMARK_INTERFERON_GAMMA_RESPONSE
HALLMARK_KRAS_SIGNALING_DN
HALLMARK_KRAS_SIGNALING_UP
HALLMARK_MITOTIC_SPINDLE
HALLMARK_MTORC1_SIGNALING
HALLMARK_MYC_TARGETS_V1
HALLMARK_MYC_TARGETS_V2
HALLMARK_MYOGENESIS
HALLMARK_NOTCH_SIGNALING
HALLMARK_OXIDATIVE_PHOSPHORYLATION
HALLMARK_P53_PATHWAY
HALLMARK_PANCREAS_BETA_CELLS
HALLMARK_PEROXISOME
HALLMARK_PI3K_AKT_MTOR_SIGNALING
HALLMARK_PROTEIN_SECRETION
HALLMARK_REACTIVE_OXYGEN_SPECIES_PA
THWAY

HALLMARK_SPERMATOGENESIS
HALLMARK_TGF_BETA_SIGNALING
HALLMARK_TNFA_SIGNALING_VIA_NFKB
HALLMARK_UNFOLDED_PROTEIN_RESPONSE
HALLMARK_UV_RESPONSE_DN
HALLMARK_UV_RESPONSE_UP
HALLMARK_WNT_BETA_CATENIN_SIGNALING
HALLMARK_XENOBIOTIC_METABOLISM
HAN_JNK_SINGALING_DN
HAN_JNK_SINGALING_UP
HAND1_TARGET_GENES
HANSON_HRAS_SIGNALING_VIA_NFKB
HARRIS_BRAIN_CANCER_PROGENITORS
HASEGAWA_TUMORIGENESIS_BY_RET_C634R
HDAC4_TARGET_GENES
HDGFL2_TARGET_GENES
HE_PTEN_TARGETS_DN
HE_PTEN_TARGETS_UP
HELLS_TARGET_GENES
HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN
HESS_TARGETS_OF_HOXA9_AND_MEIS1_UP
HEVNER_CORTEX_APICAL_AND_BASAL_INTE
RMEDIATE_PROGENITOR_CELLS

HEVNER_CORTEX_APICAL_INTERMEDIATE_P
ROGENITOR_CELLS

HEVNER_CORTEX_BASAL_INTERMEDIATE_PR
OGENITOR_CELLS

HEVNER_CORTEX_CAJAL_RETZIUS_CELLS
HEVNER_CORTEX_CAUDAL_CORTICAL_PLATE
HEVNER_CORTEX_CAUDAL_INTERMEDIATE_Z
ONE

HEVNER_CORTEX_CAUDAL_SUBVENTRICULAR
_ZONE

HEVNER_CORTEX_CAUDAL_VENTRICULAR_ZO
NE

HEVNER_CORTEX_COMMITTED_TO_CALLOSAL
_PROJECTION_NEURON_FATE

HEVNER_CORTEX_COMMITTED_TO_CORTICOT
HALAMIC_PROJECTION_NEURON_FATE

HEVNER_CORTEX_COMMITTED_TO_SUBCEREB
RAL_PROJECTION_NEURON_FATE

HEVNER_CORTEX_CORTICAL_HEM
HEVNER_CORTEX_G1_S_PHASE
HEVNER_CORTEX_INTERNEURON_PRECURSOR
_CELLS

HEVNER_CORTEX_NEURAL_STEM_AND_PROGE
NITOR_CELLS

HEVNER_CORTEX_NEURAL_STEM_CELLS
HEVNER_CORTEX_PROLIFERATING_CELLS
HEVNER_CORTEX_QUIESCENCE
HEVNER_CORTEX_RADIAL_GLIA_PROGENITO
RS

HEVNER_CORTEX_ROSTRAL_CORTICAL_PLAT
E

HEVNER_CORTEX_ROSTRAL_INTERMEDIATE_
ZONE

HEVNER_CORTEX_ROSTRAL_SUBVENTRICULA
R_ZONE

HEVNER_CORTEX_ROSTRAL_VENTRICULAR_Z
ONE

HEVNER_CORTEX_S_PHASE
HEVNER_CORTEX_VASCULAR_ENDOTHELIAL_
CELLS

HEVNER_CORTICAL_PLATE_POSTMITOTIC_N
EURONS

HEVNER_CORTICAL_PLATE_POSTMITOTIC_P
ROJECTION_NEURONS

HEVNER_HIPPOCAMPAL_CELLS
HEVNER_INTERMEDIATE_ZONE_AND_UP_POS
TMITOTIC_NEURONS

HEVNER_INTERMEDIATE_ZONE_AND_UP_POS
TMITOTIC_PROJECTION_NEURONS

HEVNER_SUBPLATE_PROJECTION_NEURONS
HEVNER_SUBVENTRICULAR_ZONE_AND_UP_N
EURON_FATE_COMMITTED_CELLS

HEVNER_SUBVENTRICULAR_ZONE_AND_UP_P
ROJECTION_NEURON_FATE_COMMITTED_CEL
LS

HEVNER_TELENCEPHALON_ASTROCYTES
HEVNER_TELENCEPHALON_CHOROID_PLEXUS
_EPITHELIAL_CELLS

HEVNER_TELENCEPHALON_ERYTHROCYTES
HEVNER_TELENCEPHALON_MENINGEAL_CELL
S

HEVNER_TELENCEPHALON_MICROGLIA
HEVNER_TELENCEPHALON_VASCULAR_ENDOT
HELIUM_AND_MENINGEAL_CELLS

HEVNER_VENTRICULAR_ZONE_AND_UP_NEUR
ON_FATE_COMMITTED_CELLS

HEVNER_VENTRICULAR_ZONE_AND_UP_PROJ
ECTION_NEURON_FATE_COMMITTED_CELLS

HEVNER_Y_CHROMOSOME_EXPRESSION
HEXIM1_TARGET_GENES
HHEX_TARGET_GENES
HIRA_TARGET_GENES
HLF_TARGET_GENES
HMCES_TARGET_GENES
HNF4G_TARGET_GENES
HNRNPK_TARGET_GENES
HOFFMANN_IMMATURE_TO_MATURE_B_LYMPH
OCYTE_DN

HOFFMANN_IMMATURE_TO_MATURE_B_LYMPH
OCYTE_UP

HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYM
PHOCYTE_DN

HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYM
PHOCYTE_UP

HOFFMANN_PRE_BI_TO_LARGE_PRE_BII_LY
MPHOCYTE_DN

HOFFMANN_PRE_BI_TO_LARGE_PRE_BII_LY
MPHOCYTE_UP

HOFFMANN_SMALL_PRE_BII_TO_IMMATURE_
B_LYMPHOCYTE_DN

HOFFMANN_SMALL_PRE_BII_TO_IMMATURE_
B_LYMPHOCYTE_UP

HOLLERN_EMT_BREAST_TUMOR_DN
HOLLERN_EMT_BREAST_TUMOR_UP
HOLLERN_MICROACINAR_BREAST_TUMOR_DN
HOLLERN_MICROACINAR_BREAST_TUMOR_UP
HOLLERN_PAPILLARY_BREAST_TUMOR
HOLLERN_SQUAMOUS_BREAST_TUMOR
HORTON_SREBF_TARGETS
HOUNKPE_HOUSEKEEPING_GENES
HOUSTIS_ROS
HOWLIN_CITED1_TARGETS_1_DN
HOWLIN_CITED1_TARGETS_1_UP
HOWLIN_CITED1_TARGETS_2_DN
HOWLIN_CITED1_TARGETS_2_UP
HOWLIN_PUBERTAL_MAMMARY_GLAND
HOXA11_TARGET_GENES
HOXC10_TARGET_GENES
HOXC12_TARGET_GENES
HOXC9_TARGET_GENES
HOXD13_TARGET_GENES
HSF1_TARGET_GENES
HSF2_TARGET_GENES
HU_GENOTOXIC_DAMAGE_24HR
HU_GENOTOXIC_DAMAGE_4HR
HU_GENOTOXIN_ACTION_DIRECT_VS_INDIR
ECT_24HR

HU_GENOTOXIN_ACTION_DIRECT_VS_INDIR
ECT_4HR

HUANG_GATA2_TARGETS_DN
HUANG_GATA2_TARGETS_UP
HUI_MAPK14_TARGETS_UP
HUMMERICH_BENIGN_SKIN_TUMOR_DN
HUMMERICH_BENIGN_SKIN_TUMOR_UP
HUMMERICH_MALIGNANT_SKIN_TUMOR_DN
HUMMERICH_MALIGNANT_SKIN_TUMOR_UP
HUMMERICH_SKIN_CANCER_PROGRESSION_D
N

HUMMERICH_SKIN_CANCER_PROGRESSION_U
P