Mouse Gene Set: LIU_OVARIAN_CANCER_TUMORS_AND_XENOGRAFTS_KINASES_DN

For the Human gene set with the same name, see LIU_OVARIAN_CANCER_TUMORS_AND_XENOGRAFTS_KINASES_DN

Standard name LIU_OVARIAN_CANCER_TUMORS_AND_XENOGRAFTS_KINASES_DN
Systematic name MM17
Brief description Targetable kinases differentially expressed between PDX and donor tumors from nine ovarian cancer patients.
Full description or abstract A bioinformatics pipeline to separate donor tumor and mouse stroma transcriptome profiles was devised and tested. To examine the molecular fidelity of PDX versus donor tumors, the authors compared mRNA differences between paired PDX-donor tumors from nine ovarian cancer patients.
Collection M2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 31004097   Authors: Liu Y,Chanana P,Davila JI,Hou X,Zanfagnin V,McGehee CD,Goode EL,Polley EC,Haluska P,Weroha SJ,Wang C
Exact source Table S9. 37 targetable kinases differentially expressed between PDX and donor tumors.
Related gene sets (show 2 additional gene sets from the source publication)

(show 12 gene sets from the same authors)
External links https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6474864/
Filtered by similarity ?
Source species Homo sapiens
Contributed by Mouse Genome Informatics (MGI) (The Jackson Laboratory (JAX))
Source platform or
identifier namespace		 HUMAN_SEQ_ACCESSION
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
Mouse Transcriptomic BodyMap compendium

Legacy heatmaps (PNG)
Mouse Transcriptomic BodyMap compendium
Advanced query Further investigate these 32 genes
Show members (show 34 source identifiers mapped to 32 genes)
Version history 2022.1.Mm: First Introduced.

See MSigDB license terms here. Please note that certain gene sets have special access terms.