Mouse Gene Set: GOBP_BASE_EXCISION_REPAIR_AP_SITE_FORMATION
For the Human gene set with the same name, see GOBP_BASE_EXCISION_REPAIR_AP_SITE_FORMATION
Standard name
GOBP_BASE_EXCISION_REPAIR_AP_SITE_FORMATION
Systematic name
MM4651
Brief description
The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired. [ISBN:0815316194]
Full description or abstract
Collection
M5: Ontology GO: Gene Ontology GO:BP: GO Biological Process
Source publication
Exact source
GO:0006285
Related gene sets
External links
http://amigo.geneontology.org/amigo/term/GO:0006285
Filtered by similarity ?
Source species
Mus musculus
Contributed by
Gene Ontology (Gene Ontology Consortium)
Source platform or identifier namespace
Mouse_NCBI_Gene_ID
Dataset references
Download gene set
format: grp | gmt | xml | json | TSV metadata
Compute overlaps ?
(show collections to investigate for overlap with this gene set)
Compendia expression profiles ?
NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds )
Mouse Transcriptomic BodyMap compendium
Legacy heatmaps (PNG)
Mouse Transcriptomic BodyMap compendium
Advanced query
Further investigate
these 5 genes
Show members
(show 5 source identifiers mapped to 5 genes)
Source Id
NCBI (Entrez) Gene Id
Gene Symbol
Gene Description
18207
18207
Nthl1
nth (endonuclease III)-like 1 (E.coli) [Source:...
18294
18294
Ogg1
8-oxoguanine DNA-glycosylase 1 [Source:MGI Symb...
21665
21665
Tdg
thymine DNA glycosylase [Source:MGI Symbol;Acc:...
22256
22256
Ung
uracil DNA glycosylase [Source:MGI Symbol;Acc:M...
22592
22592
Ercc5
excision repair cross-complementing rodent repa...
Version history
2024.1.Mm: Updated to GO Release 2024-04-24.
See MSigDB license terms here . Please note that certain gene sets
have special access terms.