Mouse Gene Set: DESCARTES_ORGANOGENESIS_ISTHMIC_ORGANIZER_CELLS


Standard name DESCARTES_ORGANOGENESIS_ISTHMIC_ORGANIZER_CELLS
Systematic name MM3650
Brief description Mouse Organogenesis Cell Atlas (MOCA) DE_gene_main_cluster.csv, fold.change>=1.5, qval<0.05, pval<0.05
Full description or abstract  
Collection M8: Cell Type Signature
Source publication Pubmed 30787437   Authors: Cao J,Spielmann M,Qiu X,Huang X,Ibrahim DM,Hill AJ,Zhang F,Mundlos S,Christiansen L,Steemers FJ,Trapnell C,Shendure J
Exact source  
Related gene sets (show 37 additional gene sets from the source publication)
External links https://oncoscape.v3.sttrcancer.org/atlas.gs.washington.edu.mouse.rna/mouse
Filtered by similarity ?
Source species Mus musculus
Contributed by Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace		 Mouse_Ensembl_Gene_ID
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
Mouse Transcriptomic BodyMap compendium

Legacy heatmaps (PNG)
Mouse Transcriptomic BodyMap compendium
Advanced query Further investigate these 19 genes
Show members (show 25 source identifiers mapped to 19 genes)
Version history 2022.1.Mm: First Introduced.

See MSigDB license terms here. Please note that certain gene sets have special access terms.