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Human Gene Set: chr6q12
Standard name
chr6q12
Systematic name
M10788
Brief description
Ensembl 112 genes in cytogenetic band chr6q12
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=6
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 26 genes
Gene families
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Categorize
these 26 genes by gene family
Show members
(
show
50 source identifiers mapped to 26 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000112245
7803
PTP4A1
protein tyrosine phosph...
ENSG00000118482
23469
PHF3
PHD finger protein 3 [S...
ENSG00000135298
577
ADGRB3
adhesion G protein-coup...
ENSG00000146166
51557
LGSN
lengsin, lens protein w...
ENSG00000188107
346007
EYS
eyes shut homolog [Sour...
ENSG00000198225
642489
FKBP1C
FKBP prolyl isomerase f...
ENSG00000201015
106481886
RNU6-280P
RNA, U6 small nuclear 2...
ENSG00000206672
ENSG00000212229
124900229
ENSG00000212229
novel transcript
ENSG00000213309
389404
RPL9P18
ribosomal protein L9 ps...
ENSG00000213312
441154
RPL7AP34
ribosomal protein L7a p...
ENSG00000214558
441155
ZC3H11C
zinc finger CCCH-type c...
ENSG00000217477
ENSG00000217811
106481661
HNRNPDP2
heterogeneous nuclear r...
ENSG00000218048
ENSG00000218274
ENSG00000218520
ENSG00000218617
ENSG00000218813
ENSG00000218834
ENSG00000218890
89761
NUFIP1P1
NUFIP1 pseudogene 1 [So...
ENSG00000219653
100462829
GCNT1P4
glucosaminyl (N-acetyl)...
ENSG00000219940
100874499
SPTLC1P3
serine palmitoyltransfe...
ENSG00000220483
442229
SLC25A51P1
SLC25A51 pseudogene 1 [...
ENSG00000223504
102723883
ENSG00000223504
novel transcript
ENSG00000225121
442227
EEF1B2P5
eukaryotic translation ...
ENSG00000226497
101928280
LINC02549
long intergenic non-pro...
ENSG00000227706
ENSG00000230910
101928307
ADGRB3-DT
ADGRB3 divergent transc...
ENSG00000232120
ENSG00000233859
642443
ADH5P4
ADH5 pseudogene 4 [Sour...
ENSG00000236345
112935969
SCAT8
S-phase cancer associat...
ENSG00000238949
100151664
RNU7-66P
RNA, U7 small nuclear 6...
ENSG00000243828
ENSG00000251965
100873468
RNA5SP208
RNA, 5S ribosomal pseud...
ENSG00000262651
ENSG00000266680
ENSG00000270509
ENSG00000270521
ENSG00000271111
ENSG00000285838
ENSG00000285976
128125822
ENSG00000285976
novel protein
ENSG00000286564
ENSG00000286680
ENSG00000287557
ENSG00000288088
ENSG00000288712
127898563
ENSG00000288712
novel protein
ENSG00000289611
ENSG00000289911
ENSG00000293117
Version history
2023.1.Hs: Updated to Ensembl 109
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