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Human Gene Set: chr6p23
Standard name
chr6p23
Systematic name
M8412
Brief description
Ensembl 112 genes in cytogenetic band chr6p23
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=6
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 17 genes
Gene families
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Categorize
these 17 genes by gene family
Show members
(
show
29 source identifiers mapped to 17 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000010017
10048
RANBP9
RAN binding protein 9 [...
ENSG00000050393
63933
MCUR1
mitochondrial calcium u...
ENSG00000112149
9308
CD83
CD83 molecule [Source:H...
ENSG00000124523
23408
SIRT5
sirtuin 5 [Source:HGNC ...
ENSG00000145990
54438
GFOD1
Gfo/Idh/MocA-like oxido...
ENSG00000180537
221687
RNF182
ring finger protein 182...
ENSG00000202351
106480896
RN7SKP204
RN7SK pseudogene 204 [S...
ENSG00000206960
106479917
RNU6-793P
RNA, U6 small nuclear 7...
ENSG00000216754
100131229
RPL6P17
ribosomal protein L6 ps...
ENSG00000218265
442162
RPS4XP7
ribosomal protein S4X p...
ENSG00000220868
359742
MRPL35P1
mitochondrial ribosomal...
ENSG00000225921
51406
NOL7
nucleolar protein 7 [So...
ENSG00000226673
102216342
LINC01108
long intergenic non-pro...
ENSG00000229646
ENSG00000230631
ENSG00000233981
ENSG00000234261
ENSG00000234540
ENSG00000237346
105374943
ENSG00000237346
novel transcript
ENSG00000237786
100874025
GFOD1-AS1
GFOD1 antisense RNA 1 [...
ENSG00000238987
106479075
RNU7-133P
RNA, U7 small nuclear 1...
ENSG00000242989
106479345
RN7SL332P
RNA, 7SL, cytoplasmic 3...
ENSG00000261071
ENSG00000272209
ENSG00000285639
ENSG00000286277
ENSG00000286281
ENSG00000286316
ENSG00000289958
Version history
2023.1.Hs: Updated to Ensembl 109
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.