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Human Gene Set: chr6p11
Standard name
chr6p11
Systematic name
M3762
Brief description
Ensembl 112 genes in cytogenetic band chr6p11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=6
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 10 genes
Gene families
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Categorize
these 10 genes by gene family
Show members
(
show
18 source identifiers mapped to 10 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000112210
51715
RAB23
RAB23, member RAS onco...
ENSG00000146143
5558
PRIM2
DNA primase subunit 2 ...
ENSG00000212017
100422884
MIR548U
microRNA 548u [Source:...
ENSG00000214561
727842
RBBP4P4
RBBP4 pseudogene 4 [So...
ENSG00000214563
642317
GAPDHP15
glyceraldehyde-3-phosp...
ENSG00000215190
106660612
LINC00680
long intergenic non-pr...
ENSG00000216687
ENSG00000218189
727805
POM121L14P
POM121 transmembrane n...
ENSG00000225096
101927293
ENSG00000225096
novel transcript
ENSG00000239650
375513
GUSBP4
GUSB pseudogene 4 [Sou...
ENSG00000266579
ENSG00000271761
ENSG00000272316
ENSG00000272541
ENSG00000275046
ENSG00000283352
106660613
LINC00680-GUSBP4
LINC00680-GUSBP4 readt...
ENSG00000286723
ENSG00000290555
106660612
LINC00680
long intergenic non-pr...
Version history
2023.1.Hs: Updated to Ensembl 109
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.