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Human Gene Set: chr5q34
Standard name
chr5q34
Systematic name
M6164
Brief description
Ensembl 112 genes in cytogenetic band chr5q34
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=5
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 41 genes
Gene families
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Categorize
these 41 genes by gene family
Show members
(
show
70 source identifiers mapped to 41 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000022355
2554
GABRA1
gamma-aminobutyric acid...
ENSG00000038274
27430
MAT2B
methionine adenosyltran...
ENSG00000072571
3161
HMMR
hyaluronan mediated mot...
ENSG00000113327
2566
GABRG2
gamma-aminobutyric acid...
ENSG00000113328
900
CCNG1
cyclin G1 [Source:HGNC ...
ENSG00000113643
5917
RARS1
arginyl-tRNA synthetase...
ENSG00000113645
23286
WWC1
WW and C2 domain contai...
ENSG00000118322
23120
ATP10B
ATPase phospholipid tra...
ENSG00000118990
100132510
GLRXP3
glutaredoxin pseudogene...
ENSG00000120137
79646
PANK3
pantothenate kinase 3 [...
ENSG00000145863
2559
GABRA6
gamma-aminobutyric acid...
ENSG00000145864
2561
GABRB2
gamma-aminobutyric acid...
ENSG00000145934
57451
TENM2
teneurin transmembrane ...
ENSG00000170584
134492
NUDCD2
NudC domain containing ...
ENSG00000188573
345630
FBLL1
fibrillarin like 1 [Sou...
ENSG00000199035
406895
MIR103A1
microRNA 103a-1 [Source...
ENSG00000201474
106479639
RNU6-164P
RNA, U6 small nuclear 1...
ENSG00000202345
ENSG00000206845
106481242
RNU6-209P
RNA, U6 small nuclear 2...
ENSG00000207739
407001
MIR218-2
microRNA 218-2 [Source:...
ENSG00000224012
ENSG00000229119
441114
RPLP0P9
ribosomal protein later...
ENSG00000233913
389342
RPL10P9
ribosomal protein L10 p...
ENSG00000241956
105377703
LINC03000
long intergenic non-pro...
ENSG00000248965
ENSG00000249449
134490
MRPL57P6
mitochondrial ribosomal...
ENSG00000250114
ENSG00000251018
101927813
HMMR-AS1
HMMR antisense RNA 1 [S...
ENSG00000251998
106479640
RNU6-168P
RNA, U6 small nuclear 1...
ENSG00000252794
106480851
RN7SKP60
RN7SK pseudogene 60 [So...
ENSG00000253065
ENSG00000253236
101927835
LINC02143
long intergenic non-pro...
ENSG00000253331
ENSG00000253357
ENSG00000253403
132532400
ENSG00000253403
novel transcript
ENSG00000253417
285629
LINC02159
long intergenic non-pro...
ENSG00000253469
101927908
ENSG00000253469
novel transcript
ENSG00000253512
ENSG00000253527
ENSG00000253538
ENSG00000253600
ENSG00000253660
ENSG00000253687
ENSG00000253693
ENSG00000253713
ENSG00000253861
100128062
SLC2A3P1
solute carrier family 2...
ENSG00000253925
ENSG00000253946
100271174
RPL21P59
ribosomal protein L21 p...
ENSG00000253947
ENSG00000253978
101927862
TENM2-AS1
TENM2 antisense RNA 2 [...
ENSG00000254042
101927969
SLIT3-AS2
SLIT3 antisense RNA 2 [...
ENSG00000254066
105377701
LINC01938
long intergenic non-pro...
ENSG00000254130
102557615
LINC01947
long intergenic non-pro...
ENSG00000254171
ENSG00000254186
ENSG00000254187
ENSG00000254192
ENSG00000254252
728843
RPL7P20
ribosomal protein L7 ps...
ENSG00000254297
ENSG00000254351
100874420
ARL2BPP5
ADP ribosylation factor...
ENSG00000254365
ENSG00000254391
ENSG00000271679
106480288
LSM1P2
LSM1 homolog, mRNA degr...
ENSG00000273569
ENSG00000279739
ENSG00000280776
104326188
LINC01202
long intergenic non-pro...
ENSG00000283612
100302238
MIR103B1
microRNA 103b-1 [Source...
ENSG00000285549
ENSG00000285590
ENSG00000289264
Version history
2023.1.Hs: Updated to Ensembl 109
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