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Human Gene Set: chr5q22
Standard name
chr5q22
Systematic name
M4614
Brief description
Ensembl 112 genes in cytogenetic band chr5q22
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=5
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 59 genes
Gene families
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Categorize
these 59 genes by gene family
Show members
(
show
84 source identifiers mapped to 59 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000047188
64848
YTHDC2
YTH N6-methyladenosine ...
ENSG00000080709
3781
KCNN2
potassium calcium-activ...
ENSG00000129595
64097
EPB41L4A
erythrocyte membrane pr...
ENSG00000129596
1036
CDO1
cysteine dioxygenase ty...
ENSG00000129625
7905
REEP5
receptor accessory prot...
ENSG00000134970
51014
TMED7
transmembrane p24 traff...
ENSG00000134982
324
APC
APC regulator of WNT si...
ENSG00000134986
9315
NREP
neuronal regeneration r...
ENSG00000134987
134430
WDR36
WD repeat domain 36 [So...
ENSG00000145777
85480
TSLP
thymic stromal lymphopo...
ENSG00000145780
56929
FEM1C
fem-1 homolog C [Source...
ENSG00000145782
9140
ATG12
autophagy related 12 [S...
ENSG00000152495
814
CAMK4
calcium/calmodulin depe...
ENSG00000152503
55521
TRIM36
tripartite motif contai...
ENSG00000153037
6728
SRP19
signal recognition part...
ENSG00000164209
91137
SLC25A46
solute carrier family 2...
ENSG00000164211
134429
STARD4
StAR related lipid tran...
ENSG00000164219
5229
PGGT1B
protein geranylgeranylt...
ENSG00000164221
153733
CCDC112
coiled-coil domain cont...
ENSG00000171444
4163
MCC
MCC regulator of WNT si...
ENSG00000172795
167227
DCP2
decapping mRNA 2 [Sourc...
ENSG00000177879
1176
AP3S1
adaptor related protein...
ENSG00000186952
642987
TMEM232
transmembrane protein 2...
ENSG00000207177
124900207
ENSG00000207177
novel transcript
ENSG00000212122
83942
TSSK1B
testis specific serine ...
ENSG00000212370
106481332
RNU6-482P
RNA, U6 small nuclear 4...
ENSG00000212643
7310
ZRSR2P1
ZRSR2 pseudogene 1 [Sou...
ENSG00000214784
402287
RPS3AP21
RPS3A pseudogene 21 [So...
ENSG00000221436
100302159
MIR548F3
microRNA 548f-3 [Source...
ENSG00000222598
106480219
RNU2-49P
RNA, U2 small nuclear 4...
ENSG00000222706
106479134
RN7SKP89
RN7SK pseudogene 89 [So...
ENSG00000224032
114915
EPB41L4A-AS1
EPB41L4A antisense RNA ...
ENSG00000232633
ENSG00000238363
654322
SNORA13
small nucleolar RNA, H/...
ENSG00000243304
ENSG00000243414
353376
TICAM2
TIR domain containing a...
ENSG00000246316
ENSG00000246859
100505678
STARD4-AS1
STARD4 antisense RNA 1 ...
ENSG00000248268
ENSG00000248350
ENSG00000248428
ENSG00000248430
100873900
HMGB3P16
high mobility group box...
ENSG00000248709
124901048
ENSG00000248709
novel transcript
ENSG00000248722
100129959
AK3P4
AK3 pseudogene 4 [Sourc...
ENSG00000248966
728366
BCLAF1P1
BCL2 associated transcr...
ENSG00000249021
ENSG00000249026
1498
CTNNA1P1
catenin alpha 1 pseudog...
ENSG00000249249
101927100
TICAM2-AS1
TICAM2 antisense RNA 1 ...
ENSG00000249318
ENSG00000249433
ENSG00000249439
100874440
HMGN1P14
high mobility group nuc...
ENSG00000249619
100874439
HMGN1P13
high mobility group nuc...
ENSG00000249791
ENSG00000249944
ENSG00000249947
7495
XBP1P1
X-box binding protein 1...
ENSG00000250045
100421861
CBX3P3
CBX3 pseudogene 3 [Sour...
ENSG00000250095
100873948
NREP-AS1
NREP antisense RNA 1 [S...
ENSG00000250197
100874441
HMGN1P15
high mobility group nuc...
ENSG00000250242
ENSG00000250358
102467214
LINC02200
long intergenic non-pro...
ENSG00000250444
402226
CCT5P1
chaperonin containing T...
ENSG00000250472
100874338
TRIM36-IT1
TRIM36 intronic transcr...
ENSG00000250728
ENSG00000250882
ENSG00000251014
100286958
TMEM183AP6
TMEM183A pseudogene 6 [...
ENSG00000251076
101927023
ENSG00000251076
novel transcript
ENSG00000251099
ENSG00000251118
115482697
H3P24
H3 histone pseudogene 2...
ENSG00000251132
ENSG00000251187
ENSG00000251201
100302736
TMED7-TICAM2
TMED7-TICAM2 readthroug...
ENSG00000251542
101927059
LINC01957
long intergenic non-pro...
ENSG00000251627
ENSG00000251741
106479543
RNU4ATAC13P
RNA, U4atac small nucle...
ENSG00000253057
106479120
RN7SKP57
RN7SK pseudogene 57 [So...
ENSG00000253613
ENSG00000258864
ENSG00000270779
ENSG00000271797
ENSG00000278921
54508
EPB41L4A-DT
EPB41L4A divergent tran...
ENSG00000286839
ENSG00000288965
ENSG00000289497
105379130
ENSG00000289497
novel transcript
ENSG00000290027
Version history
2023.1.Hs: Updated to Ensembl 109
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