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Human Gene Set: chr5q12
Standard name
chr5q12
Systematic name
M15354
Brief description
Ensembl 112 genes in cytogenetic band chr5q12
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=5
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 66 genes
Gene families
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Categorize
these 66 genes by gene family
Show members
(
show
96 source identifiers mapped to 66 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000035499
55789
DEPDC1B
DEP domain containing 1...
ENSG00000049167
1161
ERCC8
ERCC excision repair 8,...
ENSG00000049192
11174
ADAMTS6
ADAM metallopeptidase w...
ENSG00000068796
3796
KIF2A
kinesin family member 2...
ENSG00000069020
375449
MAST4
microtubule associated ...
ENSG00000086189
27292
DIMT1
DIM1 rRNA methyltransfe...
ENSG00000086200
51194
IPO11
importin 11 [Source:HGN...
ENSG00000112851
55914
ERBIN
erbb2 interacting prote...
ENSG00000113448
5144
PDE4D
phosphodiesterase 4D [S...
ENSG00000113593
23398
PPWD1
peptidylprolyl isomeras...
ENSG00000113595
373
TRIM23
tripartite motif contai...
ENSG00000113597
80006
TRAPPC13
trafficking protein par...
ENSG00000123213
57486
NLN
neurolysin [Source:HGNC...
ENSG00000123219
64105
CENPK
centromere protein K [S...
ENSG00000130449
57688
ZSWIM6
zinc finger SWIM-type c...
ENSG00000134061
4064
CD180
CD180 molecule [Source:...
ENSG00000145642
100132916
SHISAL2B
shisa like 2B [Source:H...
ENSG00000152931
25859
PART1
prostate androgen-regul...
ENSG00000153006
285672
SREK1IP1
SREK1 interacting prote...
ENSG00000153015
10283
CWC27
CWC27 spliceosome assoc...
ENSG00000153914
140890
SREK1
splicing regulatory glu...
ENSG00000164181
79993
ELOVL7
ELOVL fatty acid elonga...
ENSG00000164182
91942
NDUFAF2
NADH:ubiquinone oxidore...
ENSG00000164197
285671
RNF180
ring finger protein 180...
ENSG00000178394
3350
HTR1A
5-hydroxytryptamine rec...
ENSG00000178722
285668
C5orf64
chromosome 5 putative o...
ENSG00000186105
100130733
LRRC70
leucine rich repeat con...
ENSG00000186479
401190
RGS7BP
regulator of G protein ...
ENSG00000188725
643155
SMIM15
small integral membrane...
ENSG00000197860
54557
SGTB
small glutamine rich te...
ENSG00000199279
106479859
RNU6-661P
RNA, U6 small nuclear 6...
ENSG00000201869
106479697
RNU6-294P
RNA, U6 small nuclear 2...
ENSG00000202017
106481435
RNU6-806P
RNA, U6 small nuclear 8...
ENSG00000202601
693167
MIR582
microRNA 582 [Source:HG...
ENSG00000205644
ENSG00000207352
106479806
RNU6-540P
RNA, U6 small nuclear 5...
ENSG00000207439
ENSG00000212215
106481467
RNU6-913P
RNA, U6 small nuclear 9...
ENSG00000213891
643220
RPL3P6
ribosomal protein L3 ps...
ENSG00000213896
253013
RPL31P8
ribosomal protein L31 p...
ENSG00000214244
100856878
SETP21
SET pseudogene 21 [Sour...
ENSG00000215032
80060
GNL3LP1
G protein nucleolar 3 l...
ENSG00000217416
389293
ISCA1P1
iron-sulfur cluster ass...
ENSG00000224296
359748
MRPL49P1
mitochondrial ribosomal...
ENSG00000229666
101928794
MAST4-AS1
MAST4 antisense RNA 1 [...
ENSG00000233847
105378991
ERCC8-AS1
ERCC8 antisense RNA 1 [...
ENSG00000234838
202227
PPIAP78
peptidylprolyl isomeras...
ENSG00000236068
118568826
NT5ELP
5' nucleotidase, ecto-l...
ENSG00000240436
100271315
RPL35AP14
ribosomal protein L35a ...
ENSG00000241991
ENSG00000242547
106480372
RN7SL169P
RNA, 7SL, cytoplasmic 1...
ENSG00000248185
ENSG00000248199
ENSG00000248285
ENSG00000248288
ENSG00000248529
101928651
ENSG00000248529
novel transcript
ENSG00000248803
ENSG00000248846
101928741
LINC02065
long intergenic non-pro...
ENSG00000248935
ENSG00000249057
100874310
MAST4-IT1
MAST4 intronic transcri...
ENSG00000249279
105378992
LINC02057
long intergenic non-pro...
ENSG00000249364
101928858
LINC02997
long intergenic non-pro...
ENSG00000249579
ENSG00000249878
ENSG00000250081
ENSG00000250148
728167
KRT8P31
keratin 8 pseudogene 31...
ENSG00000250313
101928769
LINC02229
long intergenic non-pro...
ENSG00000250461
ENSG00000250732
100420512
RPEP1
ribulose-5-phosphate-3-...
ENSG00000251206
123706549
TILRLS
TCL1A interacting lncRN...
ENSG00000251279
101928630
SMIM15-AS1
SMIM15 antisense RNA 1 ...
ENSG00000251303
106481732
CAB39P1
calcium binding protein...
ENSG00000251391
ENSG00000251575
100506526
C5orf64-AS1
C5orf64 antisense RNA 1...
ENSG00000251648
ENSG00000251682
ENSG00000251983
106479165
RN7SKP157
RN7SK pseudogene 157 [S...
ENSG00000252904
124900212
ENSG00000252904
novel transcript
ENSG00000253251
112441434
SHLD3
shieldin complex subuni...
ENSG00000253744
ENSG00000268942
246715
CKS1BP3
CDC28 protein kinase re...
ENSG00000269961
118732300
ERBIN-DT
ERBIN divergent transcr...
ENSG00000273701
ENSG00000275634
ENSG00000276233
ENSG00000276945
ENSG00000279985
ENSG00000285999
ENSG00000286062
ENSG00000286314
ENSG00000286647
ENSG00000287179
ENSG00000287434
ENSG00000288643
ENSG00000288936
ENSG00000289916
105378998
ENSG00000289916
novel transcript
Version history
2023.1.Hs: Updated to Ensembl 109
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