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Human Gene Set: chr4q28
Standard name
chr4q28
Systematic name
M2374
Brief description
Ensembl 112 genes in cytogenetic band chr4q28
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=4
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
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gmt
|
xml
|
json
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 81 genes
Gene families
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Categorize
these 81 genes by gene family
Show members
(
show
147 source identifiers mapped to 81 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000077684
79960
JADE1
jade family PHD finger ...
ENSG00000138650
57575
PCDH10
protocadherin 10 [Sourc...
ENSG00000138685
2247
FGF2
fibroblast growth facto...
ENSG00000138709
55132
LARP1B
La ribonucleoprotein 1B...
ENSG00000142731
10733
PLK4
polo like kinase 4 [Sou...
ENSG00000145375
166378
AFG2A
AFG2 AAA ATPase homolog...
ENSG00000151012
23657
SLC7A11
solute carrier family 7...
ENSG00000151458
57182
ANKRD50
ankyrin repeat domain c...
ENSG00000151466
132320
SCLT1
sodium channel and clat...
ENSG00000151470
132321
C4orf33
chromosome 4 open readi...
ENSG00000151475
83447
SLC25A31
solute carrier family 2...
ENSG00000164040
10424
PGRMC2
progesterone receptor m...
ENSG00000164056
10252
SPRY1
sprouty RTK signaling a...
ENSG00000164066
27152
INTU
inturned planar cell po...
ENSG00000164070
22824
HSPA4L
heat shock protein fami...
ENSG00000164073
256471
MFSD8
major facilitator super...
ENSG00000164074
80167
ABHD18
abhydrolase domain cont...
ENSG00000170917
11162
NUDT6
nudix hydrolase 6 [Sour...
ENSG00000184139
100271209
RPL7AP28
ribosomal protein L7a p...
ENSG00000189184
54510
PCDH18
protocadherin 18 [Sourc...
ENSG00000196159
79633
FAT4
FAT atypical cadherin 4...
ENSG00000199862
ENSG00000201297
ENSG00000206782
106479666
RNU6-224P
RNA, U6 small nuclear 2...
ENSG00000207322
106480412
RNU1-89P
RNA, U1 small nuclear 8...
ENSG00000213448
391701
RPS23P2
ribosomal protein S23 p...
ENSG00000223620
132817
RBM48P1
RNA binding motif prote...
ENSG00000226655
ENSG00000228489
100271167
RPL21P50
ribosomal protein L21 p...
ENSG00000234125
391698
EEF1GP8
eukaryotic translation ...
ENSG00000240775
ENSG00000241392
106479297
RN7SL205P
RNA, 7SL, cytoplasmic 2...
ENSG00000241411
ENSG00000241651
100270934
RPL15P8
ribosomal protein L15 p...
ENSG00000244021
653156
RPL21P53
ribosomal protein L21 p...
ENSG00000244083
ENSG00000246876
101927282
LINC02466
long intergenic non-pro...
ENSG00000248104
100533844
TARS2P1
TARS2 pseudogene 1 [Sou...
ENSG00000248187
124900778
ENSG00000248187
novel transcript
ENSG00000248191
345016
PES1P1
pescadillo ribosomal bi...
ENSG00000248209
ENSG00000248305
ENSG00000248307
641365
LINC00616
long intergenic non-pro...
ENSG00000248330
100507528
LINC00613
long intergenic non-pro...
ENSG00000248369
ENSG00000248394
100419062
FOSL1P1
FOSL1 pseudogene 1 [Sou...
ENSG00000248397
105377446
LINC00498
long intergenic non-pro...
ENSG00000248434
ENSG00000248456
105377439
LINC02485
long intergenic non-pro...
ENSG00000248491
ENSG00000248506
645773
TUBAP10
tubulin alpha pseudogen...
ENSG00000248565
391696
TECRP2
trans-2,3-enoyl-CoA red...
ENSG00000248715
ENSG00000248735
100419742
R3HDM2P1
R3H domain containing 2...
ENSG00000248802
ENSG00000248869
105377441
LINC02511
long intergenic non-pro...
ENSG00000248877
100421146
PGBD4P4
piggyBac transposable e...
ENSG00000248958
391697
ZSWIM5P3
zinc finger SWIM-type c...
ENSG00000249000
ENSG00000249018
100421232
GAPDHP56
glyceraldehyde 3 phosph...
ENSG00000249038
106480683
AARS1P1
alanyl-tRNA synthetase ...
ENSG00000249091
ENSG00000249125
ENSG00000249311
646316
TERF1P3
TERF1 pseudogene 3 [Sou...
ENSG00000249416
ENSG00000249463
ENSG00000249464
285419
LINC01091
long intergenic non-pro...
ENSG00000249513
ENSG00000249555
645841
TMEM248P1
transmembrane protein 2...
ENSG00000249618
107986313
LINC02465
long intergenic non-pro...
ENSG00000249795
ENSG00000249837
ENSG00000249847
ENSG00000250033
641364
SLC7A11-AS1
SLC7A11 antisense RNA 1...
ENSG00000250034
ENSG00000250102
105377424
LINC02377
long intergenic non-pro...
ENSG00000250126
ENSG00000250144
389223
EEF1A1P35
eukaryotic translation ...
ENSG00000250149
ENSG00000250191
ENSG00000250193
ENSG00000250213
ENSG00000250241
101927359
PCDH10-DT
PCDH10 divergent transc...
ENSG00000250322
ENSG00000250341
729307
LINC02510
long intergenic non-pro...
ENSG00000250458
ENSG00000250484
111082983
PPIAP76
peptidylprolyl isomeras...
ENSG00000250503
ENSG00000250665
ENSG00000250777
ENSG00000250813
100131921
SERF1AP1
small EDRK-rich factor ...
ENSG00000250834
100418792
KRT18P54
keratin 18 pseudogene 5...
ENSG00000250865
ENSG00000250945
ENSG00000251005
100419353
H3P15
H3 histone pseudogene 1...
ENSG00000251051
100421143
ELL2P2
elongation factor for R...
ENSG00000251195
ENSG00000251199
ENSG00000251228
ENSG00000251291
105377434
LINC02462
long intergenic non-pro...
ENSG00000251326
105377420
LINC02479
long intergenic non-pro...
ENSG00000251345
100127912
CDRT15P11
CDRT15 pseudogene 11 [S...
ENSG00000251372
100874047
LINC00499
long intergenic non-pro...
ENSG00000251388
ENSG00000251398
104355285
LINC01256
long intergenic non-pro...
ENSG00000251432
100507487
LINC02615
long intergenic non-pro...
ENSG00000251436
100289295
NUP58P1
nucleoporin 58 pseudoge...
ENSG00000251440
100289663
STMN1P2
stathmin 1 pseudogene 2...
ENSG00000251488
ENSG00000251492
ENSG00000251526
107986311
LINC02435
long intergenic non-pro...
ENSG00000251555
ENSG00000251567
ENSG00000251598
ENSG00000251632
105377443
LINC02172
long intergenic non-pro...
ENSG00000251649
101927109
LINC02379
long intergenic non-pro...
ENSG00000251676
101927305
SNHG27
small nucleolar RNA hos...
ENSG00000251821
106479824
RNU6-583P
RNA, U6 small nuclear 5...
ENSG00000252014
26778
SNORA70
small nucleolar RNA, H/...
ENSG00000254535
132430
PABPC4L
poly(A) binding protein...
ENSG00000261083
101927087
LINC02516
long intergenic non-pro...
ENSG00000261166
ENSG00000261668
ENSG00000273007
ENSG00000273077
ENSG00000275647
ENSG00000279749
ENSG00000280059
ENSG00000280352
ENSG00000280711
101669763
JADRR
JADE1 adjacent regulato...
ENSG00000282855
ENSG00000283432
124900632
U6
U6 spliceosomal RNA [So...
ENSG00000283550
100302267
MIR2054
microRNA 2054 [Source:H...
ENSG00000286251
ENSG00000286253
ENSG00000286467
ENSG00000286700
ENSG00000286734
ENSG00000287021
ENSG00000287101
ENSG00000287144
ENSG00000287441
ENSG00000287748
ENSG00000287924
ENSG00000287951
124900774
ENSG00000287951
novel transcript
ENSG00000289243
ENSG00000289869
Version history
2023.1.Hs: Updated to Ensembl 109
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