login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: chr4q24
Standard name
chr4q24
Systematic name
M10517
Brief description
Ensembl 112 genes in cytogenetic band chr4q24
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=4
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 59 genes
Gene families
?
Categorize
these 59 genes by gene family
Show members
(
show
82 source identifiers mapped to 59 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000109320
4790
NFKB1
nuclear factor kappa B ...
ENSG00000109323
4126
MANBA
mannosidase beta [Sourc...
ENSG00000109332
7323
UBE2D3
ubiquitin conjugating e...
ENSG00000138777
27068
PPA2
inorganic pyrophosphata...
ENSG00000138778
1062
CENPE
centromere protein E [S...
ENSG00000138780
79807
GSTCD
glutathione S-transfera...
ENSG00000138785
57117
INTS12
integrator complex subu...
ENSG00000138814
5530
PPP3CA
protein phosphatase 3 c...
ENSG00000138821
64116
SLC39A8
solute carrier family 3...
ENSG00000145348
93627
TBCK
TBC1 domain containing ...
ENSG00000145354
493856
CISD2
CDGSH iron sulfur domai...
ENSG00000145358
115265
DDIT4L
DNA damage inducible tr...
ENSG00000153064
55024
BANK1
B cell scaffold protein...
ENSG00000164022
9255
AIMP1
aminoacyl tRNA syntheta...
ENSG00000164035
51705
EMCN
endomucin [Source:HGNC ...
ENSG00000164037
150159
SLC9B1
solute carrier family 9...
ENSG00000164038
133308
SLC9B2
solute carrier family 9...
ENSG00000164039
56898
BDH2
3-hydroxybutyrate dehyd...
ENSG00000168743
255743
NPNT
nephronectin [Source:HG...
ENSG00000168769
54790
TET2
tet methylcytosine diox...
ENSG00000168772
80319
CXXC4
CXXC finger protein 4 [...
ENSG00000169836
6870
TACR3
tachykinin receptor 3 [...
ENSG00000199529
106479770
RNU6-462P
RNA, U6 small nuclear 4...
ENSG00000200917
106480589
RNU6-553P
RNA, U6 small nuclear 5...
ENSG00000216425
402182
PIMREGP2
PIMREG pseudogene 2 [So...
ENSG00000221265
100302193
MIR1255A
microRNA 1255a [Source:...
ENSG00000224207
ENSG00000230069
106481796
LRRC37A15P
leucine rich repeat con...
ENSG00000236699
54848
ARHGEF38
Rho guanine nucleotide ...
ENSG00000241144
106481857
RN7SL728P
RNA, 7SL, cytoplasmic 7...
ENSG00000241981
100271166
RPL21P49
ribosomal protein L21 p...
ENSG00000243383
106479256
RN7SL89P
RNA, 7SL, cytoplasmic 8...
ENSG00000244470
391679
RPL6P14
ribosomal protein L6 ps...
ENSG00000245384
101929468
CXXC4-AS1
CXXC4 antisense RNA 1 [...
ENSG00000246560
105377348
UBE2D3-AS1
UBE2D3 antisense RNA 1 ...
ENSG00000248161
ENSG00000248242
ENSG00000248373
ENSG00000248740
101929448
LINC02428
long intergenic non-pro...
ENSG00000248778
ENSG00000248971
100418744
KRT8P46
keratin 8 pseudogene 46...
ENSG00000249264
441032
EEF1A1P9
eukaryotic translation ...
ENSG00000249283
777774
ACTR3BP4
ACTR3B pseudogene 4 [So...
ENSG00000249613
105377355
LINC02173
long intergenic non-pro...
ENSG00000249614
105377349
LINC02503
long intergenic non-pro...
ENSG00000249635
101929577
ENSG00000249635
novel transcript
ENSG00000249710
101929353
DDIT4L-AS1
DDIT4L antisense RNA 1 ...
ENSG00000249885
100874374
ARHGEF38-IT1
ARHGEF38 intronic trans...
ENSG00000250223
100874275
LINC01216
long intergenic non-pro...
ENSG00000250298
100507096
GIMD1
GIMAP family P-loop NTP...
ENSG00000250522
ENSG00000250651
100128183
PABPC1P7
poly(A) binding protein...
ENSG00000250670
ENSG00000250740
ENSG00000250920
ENSG00000250922
23744
ATP5F1EP1
ATP synthase F1 subunit...
ENSG00000251149
100873201
MTND5P5
MT-ND5 pseudogene 5 [So...
ENSG00000251170
ENSG00000251175
101929529
GSTCD-AS1
GSTCD antisense RNA 1 [...
ENSG00000251219
100874276
LINC01217
long intergenic non-pro...
ENSG00000251259
ENSG00000251288
ENSG00000251309
ENSG00000251473
ENSG00000251571
650560
DDX3P3
DEAD-box helicase 3 pse...
ENSG00000251572
ENSG00000251577
121233924
TACR3-AS1
TACR3 antisense RNA 1 [...
ENSG00000251586
104384744
TET2-AS1
TET2 antisense RNA 1 [S...
ENSG00000251636
107986233
LINC01218
long intergenic non-pro...
ENSG00000251906
106479722
RNU6-351P
RNA, U6 small nuclear 3...
ENSG00000252136
ENSG00000252460
106481382
RNU6-635P
RNA, U6 small nuclear 6...
ENSG00000252739
106480824
RNU7-151P
RNA, U7 small nuclear 1...
ENSG00000254531
90024
FLJ20021
uncharacterized LOC9002...
ENSG00000260651
ENSG00000273882
102465868
MIR8066
microRNA 8066 [Source:H...
ENSG00000276992
ENSG00000286124
ENSG00000286147
ENSG00000286150
ENSG00000286242
ENSG00000286291
Version history
2023.1.Hs: Updated to Ensembl 109
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.