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Human Gene Set: chr4p13
Standard name
chr4p13
Systematic name
M4395
Brief description
Ensembl 112 genes in cytogenetic band chr4p13
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=4
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 31 genes
Gene families
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Categorize
these 31 genes by gene family
Show members
(
show
48 source identifiers mapped to 31 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000014824
10463
SLC30A9
solute carrier family 3...
ENSG00000064042
22998
LIMCH1
LIM and calponin homolo...
ENSG00000109132
8929
PHOX2B
paired like homeobox 2B...
ENSG00000109133
55161
TMEM33
transmembrane protein 3...
ENSG00000124399
402175
NDUFB4P12
NADH:ubiquinone oxidore...
ENSG00000124406
10396
ATP8A1
ATPase phospholipid tra...
ENSG00000154277
7345
UCHL1
ubiquitin C-terminal hy...
ENSG00000163697
323
APBB2
amyloid beta precursor ...
ENSG00000178343
152573
SHISA3
shisa family member 3 [...
ENSG00000182308
285429
DCAF4L1
DDB1 and CUL4 associate...
ENSG00000183783
386617
KCTD8
potassium channel tetra...
ENSG00000188848
389206
BEND4
BEN domain containing 4...
ENSG00000200338
106480162
RNU1-49P
RNA, U1 small nuclear 4...
ENSG00000207481
ENSG00000213851
ENSG00000215203
389207
GRXCR1
glutaredoxin and cystei...
ENSG00000239464
106481112
RN7SL691P
RNA, 7SL, cytoplasmic 6...
ENSG00000239627
100270923
RPL12P20
ribosomal protein L12 p...
ENSG00000239679
106480493
RN7SL193P
RNA, 7SL, cytoplasmic 1...
ENSG00000240167
100270870
RPS7P7
ribosomal protein S7 ps...
ENSG00000245870
101927074
LINC00682
long intergenic non-pro...
ENSG00000248143
105374436
LINC02383
long intergenic non-pro...
ENSG00000248283
100418743
CCNL2P1
cyclin L2 pseudogene 1 ...
ENSG00000248939
ENSG00000249081
81421
OR5M14P
olfactory receptor fami...
ENSG00000249122
ENSG00000249212
485
ATP1B1P1
ATPase Na+/K+ transport...
ENSG00000249216
ENSG00000249745
100133310
HMGB1P28
high mobility group box...
ENSG00000249771
ENSG00000249887
ENSG00000250467
105374425
PHOX2B-AS1
PHOX2B antisense RNA 1 ...
ENSG00000250657
ENSG00000250781
105374428
ENSG00000250781
novel transcript
ENSG00000250863
ENSG00000251159
ENSG00000251173
101410542
UCHL1-DT
UCHL1 divergent transcr...
ENSG00000251350
100506827
LINC02475
long intergenic non-pro...
ENSG00000251501
ENSG00000251517
ENSG00000252595
106480462
RN7SKP82
RN7SK pseudogene 82 [So...
ENSG00000260519
119863863
ATP8A1-DT
ATP8A1 divergent transc...
ENSG00000272862
ENSG00000277096
ENSG00000285454
ENSG00000286891
ENSG00000287762
ENSG00000289643
124900697
ENSG00000289643
novel transcript
Version history
2023.1.Hs: Updated to Ensembl 109
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