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Human Gene Set: chr3q28
Standard name
chr3q28
Systematic name
M7149
Brief description
Ensembl 112 genes in cytogenetic band chr3q28
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=3
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 36 genes
Gene families
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Categorize
these 36 genes by gene family
Show members
(
show
41 source identifiers mapped to 36 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000073282
8626
TP63
tumor protein p63 [Sour...
ENSG00000090530
55214
P3H2
prolyl 3-hydroxylase 2 ...
ENSG00000113946
10686
CLDN16
claudin 16 [Source:HGNC...
ENSG00000152492
152137
CCDC50
coiled-coil domain cont...
ENSG00000163347
9076
CLDN1
claudin 1 [Source:HGNC ...
ENSG00000188001
285386
TPRG1
tumor protein p63 regul...
ENSG00000188729
344901
OSTN
osteocrin [Source:HGNC ...
ENSG00000188958
257313
UTS2B
urotensin 2B [Source:HG...
ENSG00000196083
3556
IL1RAP
interleukin 1 receptor ...
ENSG00000198398
131920
TMEM207
transmembrane protein 2...
ENSG00000201860
ENSG00000205835
647309
GMNC
geminin coiled-coil dom...
ENSG00000207651
407020
MIR28
microRNA 28 [Source:HGN...
ENSG00000212489
106480054
RNU6-1109P
RNA, U6 small nuclear 1...
ENSG00000214147
100131685
ENAHP1
ENAH pseudogene 1 [Sour...
ENSG00000216058
100126340
MIR944
microRNA 944 [Source:HG...
ENSG00000222583
106479193
RN7SKP222
RN7SK pseudogene 222 [S...
ENSG00000223117
106481823
RN7SKP296
RN7SK pseudogene 296 [S...
ENSG00000223812
103344926
PYDC2-AS1
PYDC2 antisense RNA 1 [...
ENSG00000224563
100873917
LPP-AS1
LPP antisense RNA 1 [So...
ENSG00000225764
101929152
P3H2-AS1
P3H2 antisense RNA 1 [S...
ENSG00000226709
100873988
FGF12-AS3
FGF12 antisense RNA 3 [...
ENSG00000227971
ENSG00000228730
105374272
LINC02013
long intergenic non-pro...
ENSG00000230077
100420621
MTAPP2
methylthioadenosine pho...
ENSG00000230115
100874027
TPRG1-AS2
TPRG1 antisense RNA 2 [...
ENSG00000230126
100873987
FGF12-AS2
FGF12 antisense RNA 2 [...
ENSG00000231047
100421581
GCNT1P3
glucosaminyl (N-acetyl)...
ENSG00000231383
100873986
FGF12-AS1
FGF12 antisense RNA 1 [...
ENSG00000232353
ENSG00000232610
100130481
CCT6P4
chaperonin containing T...
ENSG00000233308
106480738
OSTN-AS1
OSTN antisense RNA 1 [S...
ENSG00000234076
100874043
TPRG1-AS1
TPRG1 antisense RNA 1 [...
ENSG00000236182
647299
ENOPH1P1
ENOPH1 pseudogene 1 [So...
ENSG00000237653
127566428
PERPP1
PERP pseudogene 1 [Sour...
ENSG00000238077
391603
NMNAT1P3
NMNAT1 pseudogene 3 [So...
ENSG00000238902
124906347
ENSG00000238902
novel transcript
ENSG00000253548
152138
PYDC2
pyrin domain containing...
ENSG00000287178
ENSG00000288794
ENSG00000289165
124906319
ENSG00000289165
novel transcript, antis...
Version history
2023.1.Hs: Updated to Ensembl 109
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