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Human Gene Set: chr3q12
Standard name
chr3q12
Systematic name
M19018
Brief description
Ensembl 112 genes in cytogenetic band chr3q12
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=3
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 54 genes
Gene families
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Categorize
these 54 genes by gene family
Show members
(
show
70 source identifiers mapped to 54 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000036054
55773
TBC1D23
TBC1 domain family memb...
ENSG00000057019
131566
DCBLD2
discoidin, CUB and LCCL...
ENSG00000064225
10402
ST3GAL6
ST3 beta-galactoside al...
ENSG00000066422
27107
ZBTB11
zinc finger and BTB dom...
ENSG00000081148
50939
IMPG2
interphotoreceptor matr...
ENSG00000081154
57092
PCNP
PEST proteolytic signal...
ENSG00000114021
56954
NIT2
nitrilase family member...
ENSG00000114354
10342
TFG
trafficking from ER to ...
ENSG00000114391
6152
RPL24
ribosomal protein L24 [...
ENSG00000138468
57337
SENP7
SUMO specific peptidase...
ENSG00000144802
64332
NFKBIZ
NFKB inhibitor zeta [So...
ENSG00000144810
1295
COL8A1
collagen type VIII alph...
ENSG00000144815
91775
NXPE3
neurexophilin and PC-es...
ENSG00000144820
84873
ADGRG7
adhesion G protein-coup...
ENSG00000154174
9868
TOMM70
translocase of outer mi...
ENSG00000154175
25890
ABI3BP
ABI family member 3 bin...
ENSG00000168386
11259
FILIP1L
filamin A interacting p...
ENSG00000170044
131368
ZPLD1
zona pellucida like dom...
ENSG00000174173
54931
TRMT10C
tRNA methyltransferase ...
ENSG00000175841
131909
ARB2BP
ARB2 family member B, p...
ENSG00000181458
55076
TMEM45A
transmembrane protein 4...
ENSG00000182504
79598
CEP97
centrosomal protein 97 ...
ENSG00000184220
84319
CMSS1
cms1 ribosomal small su...
ENSG00000201065
106481897
RNU6-461P
RNA, U6 small nuclear 4...
ENSG00000201121
106480309
RNY1P12
RNY1 pseudogene 12 [Sou...
ENSG00000201511
ENSG00000201554
ENSG00000201642
106479948
RNU6-865P
RNA, U6 small nuclear 8...
ENSG00000202177
ENSG00000206535
348801
LNP1
leukemia NUP98 fusion p...
ENSG00000206712
100873741
RNU6-26P
RNA, U6 small nuclear 2...
ENSG00000207331
106480653
RNU6-1263P
RNA, U6 small nuclear 1...
ENSG00000212319
ENSG00000213431
100421580
ABRAXAS1P1
ABRAXAS1 pseudogene 1 [...
ENSG00000214407
152225
RDUR
RIG-I dependent antivir...
ENSG00000232830
100287852
FAM136CP
family with sequence si...
ENSG00000235156
644444
TMEM30CP
transmembrane protein 3...
ENSG00000239445
100874207
ST3GAL6-AS1
ST3GAL6 antisense RNA 1...
ENSG00000240476
105374003
LINC00973
long intergenic non-pro...
ENSG00000240572
127379713
ARHGEF28P1
ARHGEF28 pseudogene 1 [...
ENSG00000240827
100131527
RPL19P7
ribosomal protein L19 p...
ENSG00000241280
ENSG00000241305
100418920
ACTG1P13
actin gamma 1 pseudogen...
ENSG00000241738
7661
ZNF90P1
zinc finger protein 90 ...
ENSG00000241754
ENSG00000242299
100131863
RPS18P5
ribosomal protein S18 p...
ENSG00000242573
100128020
ACTR3P3
ACTR3 pseudogene 3 [Sou...
ENSG00000243089
ENSG00000243296
ENSG00000243396
391560
RPL32P7
ribosomal protein L32 p...
ENSG00000243495
100499251
GMFBP1
glia maturation factor ...
ENSG00000243974
391559
VTI1BP1
vesicle transport throu...
ENSG00000244119
285359
PDCL3P4
PDCL3 pseudogene 4 [Sou...
ENSG00000244153
339843
WWP1P1
WW domain containing E3...
ENSG00000244464
ENSG00000249274
100419185
PDLIM1P4
PDZ and LIM domain 1 ps...
ENSG00000249474
ENSG00000252348
106480114
RNU6-1256P
RNA, U6 small nuclear 1...
ENSG00000252989
ENSG00000256628
100009676
ZBTB11-AS1
ZBTB11 antisense RNA 1 ...
ENSG00000264897
100500859
MIR3921
microRNA 3921 [Source:H...
ENSG00000273374
ENSG00000275108
124903094
U7
U7 small nuclear RNA [S...
ENSG00000277000
100420473
DUSP12P1
dual specificity phosph...
ENSG00000282978
643412
BTF3P16
basic transcription fac...
ENSG00000287378
ENSG00000287682
ENSG00000289629
ENSG00000293268
124906262
ENSG00000293268
endogenous retrovirus g...
ENSG00000293379
644444
TMEM30CP
transmembrane protein 3...
Version history
2023.1.Hs: Updated to Ensembl 109
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