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Human Gene Set: chr3q11
Standard name
chr3q11
Systematic name
M5965
Brief description
Ensembl 112 genes in cytogenetic band chr3q11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=3
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 54 genes
Gene families
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Categorize
these 54 genes by gene family
Show members
(
show
71 source identifiers mapped to 54 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000080200
131544
CRYBG3
crystallin beta-gamma d...
ENSG00000080224
285220
EPHA6
EPH receptor A6 [Source...
ENSG00000080819
1371
CPOX
coproporphyrinogen oxid...
ENSG00000080822
56650
CLDND1
claudin domain containi...
ENSG00000113966
84100
ARL6
ADP ribosylation factor...
ENSG00000154165
2838
GPR15
G protein-coupled recep...
ENSG00000169379
200894
ARL13B
ADP ribosylation factor...
ENSG00000170854
84864
RIOX2
ribosomal oxygenase 2 [...
ENSG00000176243
100129736
CDV3P1
CDV3 pseudogene 1 [Sour...
ENSG00000178660
389137
ARMC10P1
armadillo repeat contai...
ENSG00000178694
63899
NSUN3
NOP2/Sun RNA methyltran...
ENSG00000178700
200895
DHFR2
dihydrofolate reductase...
ENSG00000178750
415117
STX19
syntaxin 19 [Source:HGN...
ENSG00000183185
200959
GABRR3
gamma-aminobutyric acid...
ENSG00000184500
5627
PROS1
protein S [Source:HGNC ...
ENSG00000187900
79291
OR5H7P
olfactory receptor fami...
ENSG00000196098
403278
OR5K4
olfactory receptor fami...
ENSG00000196578
81050
OR5AC2
olfactory receptor fami...
ENSG00000197938
79310
OR5H2
olfactory receptor fami...
ENSG00000199286
106480047
RNU6-1094P
RNA, U6 small nuclear 1...
ENSG00000200366
106479793
RNU6-511P
RNA, U6 small nuclear 5...
ENSG00000201339
ENSG00000206536
403277
OR5K3
olfactory receptor fami...
ENSG00000213439
81431
OR5AC1
olfactory receptor fami...
ENSG00000218754
644082
RPL18AP8
ribosomal protein L18a ...
ENSG00000230301
79295
OR5H6
olfactory receptor fami...
ENSG00000231192
26341
OR5H1
olfactory receptor fami...
ENSG00000231861
402135
OR5K2
olfactory receptor fami...
ENSG00000232382
26339
OR5K1
olfactory receptor fami...
ENSG00000232535
79289
OR5H8
olfactory receptor fami...
ENSG00000233412
403274
OR5H15
olfactory receptor fami...
ENSG00000234629
728505
WDR82P1
WD repeat domain 82 pse...
ENSG00000236032
403273
OR5H14
olfactory receptor fami...
ENSG00000239589
255025
LINC00879
long intergenic non-pro...
ENSG00000239614
100129555
HMGN1P7
high mobility group nuc...
ENSG00000241018
100131442
RCC2P5
regulator of chromosome...
ENSG00000241815
391556
RBBP4P7
RBBP4 pseudogene 7 [Sou...
ENSG00000242457
100420527
RBBP4P2
RBBP4 pseudogene 2 [Sou...
ENSG00000242911
ENSG00000243547
644063
HNRNPKP4
heterogeneous nuclear r...
ENSG00000244048
100271076
RPS18P6
ribosomal protein S18 p...
ENSG00000244653
100130484
UBFD1P1
ubiquitin family domain...
ENSG00000244681
100287639
MTHFD2P1
methylenetetrahydrofola...
ENSG00000248365
100009669
POU5F1P7
POU class 5 homeobox 1 ...
ENSG00000248507
79299
OR5H4P
olfactory receptor fami...
ENSG00000248839
ENSG00000249225
ENSG00000249321
79297
OR5H5P
olfactory receptor fami...
ENSG00000249975
79309
OR5H3P
olfactory receptor fami...
ENSG00000250562
100130963
RPL38P4
RPL38 pseudogene 4 [Sou...
ENSG00000250750
79491
OR5BM1P
olfactory receptor fami...
ENSG00000251088
ENSG00000251090
403271
OR5AC4P
olfactory receptor fami...
ENSG00000251172
127379748
TPTE2P7
TPTE2 pseudogene 7 [Sou...
ENSG00000251727
106479782
RNU6-488P
RNA, U6 small nuclear 4...
ENSG00000261292
ENSG00000271671
ENSG00000278103
102465864
MIR8060
microRNA 8060 [Source:H...
ENSG00000279658
ENSG00000282527
ENSG00000283367
ENSG00000283544
101930420
LOC101930420
primase, DNA, polypepti...
ENSG00000285614
ENSG00000285635
ENSG00000286447
124909397
ENSG00000286447
novel transcript
ENSG00000286516
ENSG00000286602
ENSG00000289078
105373997
ENSG00000289078
novel transcript
ENSG00000289509
ENSG00000290819
ENSG00000293294
100287639
MTHFD2P1
methylenetetrahydrofola...
Version history
2023.1.Hs: Updated to Ensembl 109
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