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Human Gene Set: chr3p23
Standard name
chr3p23
Systematic name
M4690
Brief description
Ensembl 112 genes in cytogenetic band chr3p23
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=3
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 10 genes
Gene families
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Categorize
these 10 genes by gene family
Show members
(
show
11 source identifiers mapped to 10 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000144644
339896
GADL1
glutamate decarboxylase lik...
ENSG00000163527
201595
STT3B
STT3 oligosaccharyltransfer...
ENSG00000197385
344787
ZNF860
zinc finger protein 860 [So...
ENSG00000213854
339897
CNN2P6
calponin 2 pseudogene 6 [So...
ENSG00000222983
100873397
RNA5SP127
RNA, 5S ribosomal pseudogen...
ENSG00000223965
100419751
ZNF587P1
zinc finger protein 587 pse...
ENSG00000227339
391524
THRAP3P1
THRAP3 pseudogene 1 [Source...
ENSG00000230111
115482708
H3P11
H3 histone pseudogene 11 [S...
ENSG00000232490
100874206
OSBPL10-AS1
OSBPL10 antisense RNA 1 [So...
ENSG00000265376
100423038
MIR466
microRNA 466 [Source:HGNC S...
ENSG00000288926
Version history
2023.1.Hs: Updated to Ensembl 109
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.