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Human Gene Set: chr3p11
Standard name
chr3p11
Systematic name
M5512
Brief description
Ensembl 112 genes in cytogenetic band chr3p11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=3
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 26 genes
Gene families
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Categorize
these 26 genes by gene family
Show members
(
show
30 source identifiers mapped to 26 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000044524
2042
EPHA3
EPH receptor A3 [Source...
ENSG00000064835
5449
POU1F1
POU class 1 homeobox 1 ...
ENSG00000083937
25978
CHMP2B
charged multivesicular ...
ENSG00000163320
8545
CGGBP1
CGG triplet repeat bind...
ENSG00000175105
55279
ZNF654
zinc finger protein 654...
ENSG00000179021
285237
C3orf38
chromosome 3 open readi...
ENSG00000179097
3355
HTR1F
5-hydroxytryptamine rec...
ENSG00000189002
5628
PROS2P
protein S (beta) pseudo...
ENSG00000200703
106479951
RNU6-873P
RNA, U6 small nuclear 8...
ENSG00000207316
ENSG00000212598
124900922
U3
Small nucleolar RNA U3 ...
ENSG00000221059
106479545
RNU6ATAC6P
RNA, U6atac small nucle...
ENSG00000222490
106481404
RNU6-712P
RNA, U6 small nuclear 7...
ENSG00000239572
ENSG00000239829
402134
KRT8P25
keratin 8 pseudogene 25...
ENSG00000240255
643766
PSMC1P6
proteasome 26S subunit,...
ENSG00000240309
107075137
MTCO1P6
MT-CO1 pseudogene 6 [So...
ENSG00000240902
100129005
APOOP2
apolipoprotein O pseudo...
ENSG00000240951
107075266
MTCO2P6
MT-CO2 pseudogene 6 [So...
ENSG00000241535
100151661
CBX5P1
chromobox 5 pseudogene ...
ENSG00000241861
100421236
GAPDHP50
glyceraldehyde 3 phosph...
ENSG00000242159
344653
ABCF2P1
ATP binding cassette su...
ENSG00000242365
100130327
NDUFA5P5
NADH:ubiquinone oxidore...
ENSG00000242705
728432
ICE2P2
interactor of little el...
ENSG00000264119
100616161
MIR4795
microRNA 4795 [Source:H...
ENSG00000271024
106481675
HSPE1P19
heat shock protein fami...
ENSG00000283434
111064647
CSNKA2IP
casein kinase 2 subunit...
ENSG00000285780
ENSG00000288654
128031834
ENSG00000288654
novel protein
ENSG00000288780
Version history
2023.1.Hs: Updated to Ensembl 109
See
MSigDB license terms here
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