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Human Gene Set: chr21p11
Standard name
chr21p11
Systematic name
M16860
Brief description
Ensembl 112 genes in cytogenetic band chr21p11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=21
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 39 genes
Gene families
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Categorize
these 39 genes by gene family
Show members
(
show
98 source identifiers mapped to 39 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000187172
85319
BAGE2
BAGE family member 2 (p...
ENSG00000188681
100132288
TEKT4P2
tektin 4 pseudogene 2 [...
ENSG00000252199
26778
SNORA70
small nucleolar RNA, H/...
ENSG00000264002
106480937
RN7SL52P
RNA, 7SL, cytoplasmic 5...
ENSG00000264063
ENSG00000264462
103504731
MIR3648-2
microRNA 3648-2 [Source...
ENSG00000270533
ENSG00000273590
102723553
ENSG00000273590
small integral membrane...
ENSG00000273840
ENSG00000273872
100422636
SLC25A15P4
solute carrier family 2...
ENSG00000274046
ENSG00000274060
103504727
MIR6724-2
microRNA 6724-2 [Source...
ENSG00000274391
7179
TPTE
transmembrane phosphata...
ENSG00000274484
ENSG00000274868
ENSG00000275215
109910381
RNA5-8SN3
RNA, 5.8S ribosomal N3 ...
ENSG00000275592
100132759
VN1R7P
vomeronasal 1 receptor ...
ENSG00000275631
ENSG00000275664
ENSG00000275692
103504733
MIR6724-4
microRNA 6724-4 [Source...
ENSG00000275708
100500862
MIR3648-1
microRNA 3648-1 [Source...
ENSG00000275945
54053
EIF3FP1
eukaryotic translation ...
ENSG00000275950
102465433
MIR6724-1
microRNA 6724-1 [Source...
ENSG00000276077
102724951
LINC03105
long intergenic non-pro...
ENSG00000276289
102723475
ENSG00000276289
potassium channel, volt...
ENSG00000276546
ENSG00000276556
ENSG00000277067
102724843
ENSG00000277067
novel transcript
ENSG00000277277
102723451
ENSG00000277277
novel protein identical...
ENSG00000277282
390530
IGHV1OR21-1
immunoglobulin heavy va...
ENSG00000277379
103504739
MIR6724-3
microRNA 6724-3 [Source...
ENSG00000277437
ENSG00000277671
ENSG00000277693
ENSG00000277739
110255170
RNA5-8S5
5.8S ribosomal RNA [Sou...
ENSG00000277991
ENSG00000278106
ENSG00000278189
106632260
RNA5-8SN1
RNA, 5.8S ribosomal N1 ...
ENSG00000278233
109864281
RNA5-8SN2
RNA, 5.8S ribosomal N2 ...
ENSG00000278678
360186
CYCSP41
CYCS pseudogene 41 [Sou...
ENSG00000278775
ENSG00000278884
ENSG00000278931
ENSG00000278932
105379428
ENSG00000278932
novel transcript
ENSG00000278961
107983987
ENSG00000278961
novel protein
ENSG00000278996
ENSG00000279062
100420925
CDRT15P8
CDRT15 pseudogene 8 [So...
ENSG00000279167
ENSG00000279177
107987306
CTBP2P9
CTBP2 pseudogene 9 [Sou...
ENSG00000279208
ENSG00000279211
ENSG00000279213
100419040
SNX18P10
sorting nexin 18 pseudo...
ENSG00000279303
ENSG00000279321
ENSG00000279381
ENSG00000279414
105372731
CDRT15P9
CDRT15 pseudogene 9 [So...
ENSG00000279477
ENSG00000279501
ENSG00000279579
105372730
LINC01666
long intergenic non-pro...
ENSG00000279615
ENSG00000279647
ENSG00000279718
131183826
SNX18P12
sorting nexin 18 pseudo...
ENSG00000279720
100419957
SOWAHCP2
SOWAHC pseudogene 2 [So...
ENSG00000279783
ENSG00000279851
ENSG00000279864
105379511
NCOR1P4
NCOR1 pseudogene 4 [Sou...
ENSG00000279895
ENSG00000279967
ENSG00000279990
100996520
RPSAP68
ribosomal protein SA ps...
ENSG00000280081
441058
LINC01667
long intergenic non-pro...
ENSG00000280243
56167
MTCO1P1
MT-CO1 pseudogene 1 [So...
ENSG00000280330
107987305
CTBP2P10
CTBP2 pseudogene 10 [So...
ENSG00000280372
ENSG00000280436
ENSG00000280441
ENSG00000280614
ENSG00000280800
ENSG00000281181
ENSG00000281383
ENSG00000286012
ENSG00000286032
ENSG00000286033
ENSG00000286054
ENSG00000286057
ENSG00000286091
ENSG00000286103
ENSG00000286146
ENSG00000286148
ENSG00000286149
ENSG00000286155
ENSG00000286178
ENSG00000286252
ENSG00000286267
ENSG00000290523
ENSG00000291050
100132288
TEKT4P2
tektin 4 pseudogene 2 [...
ENSG00000293035
441058
LINC01667
long intergenic non-pro...
ENSG00000293037
ENSG00000293062
Version history
2023.1.Hs: Updated to Ensembl 109
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