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Human Gene Set: chr20q12
Standard name
chr20q12
Systematic name
M15289
Brief description
Ensembl 112 genes in cytogenetic band chr20q12
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=20
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 26 genes
Gene families
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Categorize
these 26 genes by gene family
Show members
(
show
41 source identifiers mapped to 26 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000124177
84181
CHD6
chromodomain helicase D...
ENSG00000124181
5335
PLCG1
phospholipase C gamma 1...
ENSG00000132793
64900
LPIN3
lipin 3 [Source:HGNC Sy...
ENSG00000174306
23051
ZHX3
zinc fingers and homeob...
ENSG00000183798
90187
EMILIN3
elastin microfibril int...
ENSG00000198900
7150
TOP1
DNA topoisomerase I [So...
ENSG00000204103
9935
MAFB
MAF bZIP transcription ...
ENSG00000212224
124900463
ENSG00000212224
novel transcript
ENSG00000222612
107080629
RNU2-52P
RNA, U2 small nuclear 5...
ENSG00000223190
106479139
RN7SKP100
RN7SK pseudogene 100 [S...
ENSG00000223410
ENSG00000223651
643172
ENSG00000223651
neurofilament heavy pol...
ENSG00000224357
100135756
ATG3P1
autophagy related 3 pse...
ENSG00000225458
ENSG00000226648
101927117
PLCG1-AS1
PLCG1 antisense RNA 1 [...
ENSG00000227599
101927138
PTPRT-AS1
PTPRT antisense RNA 1 [...
ENSG00000228959
ENSG00000229042
101927159
ENSG00000229042
novel transcript, antis...
ENSG00000229398
ENSG00000229771
ENSG00000229892
ENSG00000229976
ENSG00000230324
339568
LINC01734
long intergenic non-pro...
ENSG00000232493
128467
RPL12P11
ribosomal protein L12 p...
ENSG00000233415
ENSG00000234878
140895
HSPE1P1
heat shock protein fami...
ENSG00000235088
ENSG00000235102
100130936
ADI1P1
acireductone dioxygenas...
ENSG00000237767
100505663
LINC01370
long intergenic non-pro...
ENSG00000238908
100873726
RNA5SP484
RNA, 5S ribosomal pseud...
ENSG00000242748
100271627
RPL23AP81
ribosomal protein L23a ...
ENSG00000252386
106481502
RNU6-1018P
RNA, U6 small nuclear 1...
ENSG00000263989
106479446
RN7SL615P
RNA, 7SL, cytoplasmic 6...
ENSG00000272407
ENSG00000273951
ENSG00000275337
106480380
RN7SL680P
RNA, 7SL, cytoplasmic 6...
ENSG00000276169
102466912
MIR6871
microRNA 6871 [Source:H...
ENSG00000286083
ENSG00000286972
ENSG00000287983
ENSG00000288843
Version history
2023.1.Hs: Updated to Ensembl 109
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