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Human Gene Set: chr1p12
Standard name
chr1p12
Systematic name
M14892
Brief description
Ensembl 112 genes in cytogenetic band chr1p12
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=1
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 53 genes
Gene families
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Categorize
these 53 genes by gene family
Show members
(
show
66 source identifiers mapped to 53 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000065183
10885
WDR3
WD repeat domain 3 [Sou...
ENSG00000092607
6913
TBX15
T-box transcription fac...
ENSG00000092621
26227
PHGDH
phosphoglycerate dehydr...
ENSG00000116874
10352
WARS2
tryptophanyl tRNA synth...
ENSG00000116882
51179
HAO2
hydroxyacid oxidase 2 [...
ENSG00000134193
83998
REG4
regenerating family mem...
ENSG00000134240
3158
HMGCS2
3-hydroxy-3-methylgluta...
ENSG00000134249
11085
ADAM30
ADAM metallopeptidase d...
ENSG00000134250
4853
NOTCH2
notch receptor 2 [Sourc...
ENSG00000134258
79679
VTCN1
V-set domain containing...
ENSG00000143067
90874
ZNF697
zinc finger protein 697...
ENSG00000155761
200162
SPAG17
sperm associated antige...
ENSG00000183508
54855
TENT5C
terminal nucleotidyltra...
ENSG00000187481
391076
HSD3BP1
hydroxy-delta-5-steroid...
ENSG00000194297
106480172
RNU1-75P
RNA, U1 small nuclear 7...
ENSG00000196505
54834
GDAP2
ganglioside induced dif...
ENSG00000198162
10905
MAN1A2
mannosidase alpha class...
ENSG00000198857
391081
HSD3BP5
hydroxy-delta-5-steroid...
ENSG00000203855
128102
HSD3BP4
hydroxy-delta-5-steroid...
ENSG00000203857
3283
HSD3B1
hydroxy-delta-5-steroid...
ENSG00000203858
440606
HSD3BP2
hydroxy-delta-5-steroid...
ENSG00000203859
3284
HSD3B2
hydroxy-delta-5-steroid...
ENSG00000207149
106481326
RNU6-465P
RNA, U6 small nuclear 4...
ENSG00000212266
124900444
ENSG00000212266
novel transcript
ENSG00000213262
401959
VDAC2P3
VDAC2 pseudogene 3 [Sou...
ENSG00000215864
343505
NBPF7P
NBPF member 7, pseudoge...
ENSG00000222209
100873294
RNA5SP56
RNA, 5S ribosomal pseud...
ENSG00000223575
100421047
RBMX2P3
RBMX2 pseudogene 3 [Sou...
ENSG00000223804
ENSG00000224238
104472716
WARS2-IT1
WARS2 intronic transcri...
ENSG00000226126
644094
PSMC1P12
proteasome 26S subunit,...
ENSG00000226172
105378933
ENSG00000226172
novel transcript
ENSG00000226443
644213
GAPDHP32
glyceraldehyde 3 phosph...
ENSG00000226446
100420260
NOTCH2P1
notch 2 pseudogene 1 [S...
ENSG00000226755
441899
VPS25P1
VPS25 pseudogene 1 [Sou...
ENSG00000227056
343495
RPL6P2
ribosomal protein L6 ps...
ENSG00000227205
767850
PFN1P9
profilin 1 pseudogene 9...
ENSG00000227712
ENSG00000228217
100131261
PNRC2P1
proline rich nuclear re...
ENSG00000229570
391077
GAPDHP58
glyceraldehyde 3 phosph...
ENSG00000229911
ENSG00000230921
100874270
HAO2-IT1
HAO2 intronic transcrip...
ENSG00000231365
101929147
WARS2-AS1
WARS2 antisense RNA 1 [...
ENSG00000232650
105378934
LINC01780
long intergenic non-pro...
ENSG00000232780
391073
GAPDHP74
glyceraldehyde-3-phosph...
ENSG00000235202
104355292
LINC01525
long intergenic non-pro...
ENSG00000235595
391075
GAPDHP23
glyceraldehyde 3 phosph...
ENSG00000236804
100270905
RPS3AP12
RPS3A pseudogene 12 [So...
ENSG00000236866
100996263
TENT5C-DT
TENT5C divergent transc...
ENSG00000239216
ENSG00000239873
401960
GAPDHP27
glyceraldehyde 3 phosph...
ENSG00000240244
644237
GAPDHP33
glyceraldehyde 3 phosph...
ENSG00000249798
441900
HSD3BP3
hydroxy-delta-5-steroid...
ENSG00000260941
644242
LINC00622
long intergenic non-pro...
ENSG00000265808
9554
SEC22B
SEC22 homolog B, vesicl...
ENSG00000270719
ENSG00000271427
ENSG00000273406
ENSG00000273727
124904613
U1
U1 spliceosomal RNA [So...
ENSG00000274642
ENSG00000277141
ENSG00000277313
ENSG00000279513
ENSG00000287980
105378930
ENSG00000287980
novel transcript
ENSG00000290569
ENSG00000293080
Version history
2023.1.Hs: Updated to Ensembl 109
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