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Human Gene Set: chr16q11
Standard name
chr16q11
Systematic name
M19266
Brief description
Ensembl 112 genes in cytogenetic band chr16q11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=16
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 12 genes
Gene families
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Categorize
these 12 genes by gene family
Show members
(
show
21 source identifiers mapped to 12 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000069329
55737
VPS35
VPS35 retromer complex compon...
ENSG00000069345
10294
DNAJA2
DnaJ heat shock protein famil...
ENSG00000091651
23594
ORC6
origin recognition complex su...
ENSG00000140795
91807
MYLK3
myosin light chain kinase 3 [...
ENSG00000155330
388272
C16orf87
chromosome 16 open reading fr...
ENSG00000166123
84706
GPT2
glutamic--pyruvic transaminas...
ENSG00000171241
79801
SHCBP1
SHC binding and spindle assoc...
ENSG00000199448
106479940
RNU6-845P
RNA, U6 small nuclear 845, ps...
ENSG00000259856
440375
RAB43P1
RAB43 pseudogene 1 [Source:HG...
ENSG00000260251
ENSG00000260782
ENSG00000260889
1157
CKBP1
creatine kinase B pseudogene ...
ENSG00000260909
ENSG00000261131
ENSG00000261173
119545626
DNAJA2-DT
DNAJA2 divergent transcript [...
ENSG00000261239
124149
ANKRD26P1
ankyrin repeat domain 26 pseu...
ENSG00000261356
ENSG00000261512
ENSG00000261725
ENSG00000280376
ENSG00000290429
Version history
2023.1.Hs: Updated to Ensembl 109
See
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