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Human Gene Set: chr13q34
Standard name
chr13q34
Systematic name
M1302
Brief description
Ensembl 112 genes in cytogenetic band chr13q34
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=13
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
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TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 88 genes
Gene families
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Categorize
these 88 genes by gene family
Show members
(
show
120 source identifiers mapped to 88 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000057593
2155
F7
coagulation factor VII ...
ENSG00000068650
23250
ATP11A
ATPase phospholipid tra...
ENSG00000088448
55608
ANKRD10
ankyrin repeat domain 1...
ENSG00000102606
8874
ARHGEF7
Rho guanine nucleotide ...
ENSG00000126216
10426
TUBGCP3
tubulin gamma complex c...
ENSG00000126217
23263
MCF2L
MCF.2 cell line derived...
ENSG00000126218
2159
F10
coagulation factor X [S...
ENSG00000126226
55795
PCID2
PCI domain containing 2...
ENSG00000126231
8858
PROZ
protein Z, vitamin K de...
ENSG00000130177
8881
CDC16
cell division cycle 16 ...
ENSG00000134871
1284
COL4A2
collagen type IV alpha ...
ENSG00000134905
79587
CARS2
cysteinyl-tRNA syntheta...
ENSG00000139832
55647
RAB20
RAB20, member RAS oncog...
ENSG00000139835
79774
GRTP1
growth hormone regulate...
ENSG00000139842
8451
CUL4A
cullin 4A [Source:HGNC ...
ENSG00000150401
55208
DCUN1D2
defective in cullin ned...
ENSG00000150403
55002
TMCO3
transmembrane and coile...
ENSG00000153487
3621
ING1
inhibitor of growth fam...
ENSG00000153495
121793
TEX29
testis expressed 29 [So...
ENSG00000153498
122258
SPACA7
sperm acrosome associat...
ENSG00000153531
113622
ADPRHL1
ADP-ribosylhydrolase li...
ENSG00000169062
65110
UPF3A
UPF3A regulator of nons...
ENSG00000182968
6656
SOX1
SRY-box transcription f...
ENSG00000183087
2621
GAS6
growth arrest specific ...
ENSG00000184497
348013
TMEM255B
transmembrane protein 2...
ENSG00000185896
3916
LAMP1
lysosomal associated me...
ENSG00000185950
8660
IRS2
insulin receptor substr...
ENSG00000185974
6011
GRK1
G protein-coupled recep...
ENSG00000185989
22821
RASA3
RAS p21 protein activat...
ENSG00000186009
496
ATP4B
ATPase H+/K+ transporti...
ENSG00000187498
1282
COL4A1
collagen type IV alpha ...
ENSG00000197595
400165
ATP11AUN
ATP11A upstream neighbo...
ENSG00000198176
7027
TFDP1
transcription factor Dp...
ENSG00000198824
283489
CHAMP1
chromosome alignment ma...
ENSG00000200072
124900341
ENSG00000200072
novel transcript
ENSG00000201161
100873873
RN7SKP10
RN7SK pseudogene 10 [So...
ENSG00000202347
100873860
RNU1-16P
RNA, U1 small nuclear 1...
ENSG00000204398
ENSG00000213995
55739
NAXD
NAD(P)HX dehydratase [S...
ENSG00000215881
105370369
LINC02337
long intergenic non-pro...
ENSG00000223626
104266956
LINC01044
long intergenic non-pro...
ENSG00000224243
100505996
SOX1-OT
SOX1 overlapping transc...
ENSG00000224821
100129836
COL4A2-AS2
COL4A2 antisense RNA 2 ...
ENSG00000225083
100874068
GRTP1-AS1
GRTP1 antisense RNA 1 [...
ENSG00000225239
644627
RPL21P107
ribosomal protein L21 p...
ENSG00000225760
104355135
LINC00431
long intergenic non-pro...
ENSG00000225870
101927802
LINC00368
long intergenic non-pro...
ENSG00000226158
100128145
CLCP2
Charcot-Leyden crystal ...
ENSG00000226903
101928616
LINC00354
long intergenic non-pro...
ENSG00000226921
100874178
LINC00454
long intergenic non-pro...
ENSG00000227105
144
PARP1P1
poly(ADP-ribose) polyme...
ENSG00000227352
100874226
ARHGEF7-AS1
ARHGEF7 antisense RNA 1...
ENSG00000229152
100505494
ANKRD10-IT1
ANKRD10 intronic transc...
ENSG00000229373
643365
LINC00452
long intergenic non-pro...
ENSG00000229520
100874160
LINC00404
long intergenic non-pro...
ENSG00000229723
104355150
LINC01054
long intergenic non-pro...
ENSG00000230371
100419560
KARS1P2
lysyl-tRNA synthetase 1...
ENSG00000231428
104355146
LINC00396
long intergenic non-pro...
ENSG00000231882
104413892
F10-AS1
F10 antisense RNA 1 [So...
ENSG00000232487
100874321
RASA3-IT1
RASA3 intronic transcri...
ENSG00000232662
100289475
LDHBP1
lactate dehydrogenase B...
ENSG00000232684
100874205
ATP11A-AS1
ATP11A antisense RNA 1 ...
ENSG00000232814
100874203
COL4A2-AS1
COL4A2 antisense RNA 1 ...
ENSG00000233613
100874229
DCUN1D2-AS
DCUN1D2 antisense RNA [...
ENSG00000233644
100874371
ARHGEF7-IT1
ARHGEF7 intronic transc...
ENSG00000233695
650669
GAS6-AS1
GAS6 antisense RNA 1 [S...
ENSG00000234854
101409253
LINC00676
long intergenic non-pro...
ENSG00000235280
100289410
MCF2L-AS1
MCF2L antisense RNA 1 [...
ENSG00000235875
100874238
ARHGEF7-AS2
ARHGEF7 antisense RNA 2...
ENSG00000237699
ENSG00000255874
283487
PRECSIT
p53 regulated carcinoma...
ENSG00000259831
283486
LINC00567
long intergenic non-pro...
ENSG00000260102
101928698
LINC01070
long intergenic non-pro...
ENSG00000260343
101928752
LINC01043
long intergenic non-pro...
ENSG00000260385
ENSG00000260615
102723647
RPL23AP97
ribosomal protein L23a ...
ENSG00000260910
100861555
SWINGN
SWI/SNF complex interac...
ENSG00000264539
100847035
MIR548AR
microRNA 548ar [Source:...
ENSG00000265450
100616227
MIR4502
microRNA 4502 [Source:H...
ENSG00000265885
106479505
RN7SL783P
RNA, 7SL, cytoplasmic 7...
ENSG00000267868
ENSG00000269125
ENSG00000269356
ENSG00000269376
ENSG00000272695
100506394
GAS6-DT
GAS6 divergent transcri...
ENSG00000274331
ENSG00000274614
ENSG00000274766
ENSG00000274922
ENSG00000275248
ENSG00000275741
ENSG00000275830
101927646
LINC03082
long intergenic non-pro...
ENSG00000275880
127138861
NAXD-AS1
NAXD antisense RNA 1 [S...
ENSG00000275989
105370364
SPACA7BP
SPACA7 family member B,...
ENSG00000276248
ENSG00000276269
ENSG00000276434
ENSG00000276765
102465872
MIR8073
microRNA 8073 [Source:H...
ENSG00000276916
ENSG00000277159
ENSG00000277545
ENSG00000277767
ENSG00000277942
102465874
MIR8075
microRNA 8075 [Source:H...
ENSG00000279237
ENSG00000279770
100130386
LINC00552
long intergenic non-pro...
ENSG00000279965
105370361
LINC03032
long intergenic non-pro...
ENSG00000283199
100507747
C13orf46
chromosome 13 open read...
ENSG00000283347
ENSG00000283361
101929355
CFAP97D2
CFAP97 domain containin...
ENSG00000283828
102724474
ENSG00000283828
novel transcript, antis...
ENSG00000285534
ENSG00000285672
ENSG00000285856
ENSG00000286824
ENSG00000287575
ENSG00000289010
ENSG00000289354
ENSG00000289904
ENSG00000290807
105370364
SPACA7BP
SPACA7 family member B,...
ENSG00000290808
Version history
2023.1.Hs: Updated to Ensembl 109
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