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Human Gene Set: chr13q11
Standard name
chr13q11
Systematic name
M12340
Brief description
Ensembl 112 genes in cytogenetic band chr13q11
Full description or abstract
Collection
C1: Positional
Source publication
Exact source
Ensembl 112 human gene annotation on the GRCh38.p13 reference chromosomes only.
Related gene sets
External links
https://ensembl.org/Homo_sapiens/Location/Chromosome?r=13
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 25 genes
Gene families
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Categorize
these 25 genes by gene family
Show members
(
show
31 source identifiers mapped to 25 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000204718
100131550
CNN2P12
calponin 2 pseudogene 12 [...
ENSG00000206192
284232
ANKRD20A9P
ankyrin repeat domain 20 f...
ENSG00000206787
100873777
RNU6-76P
RNA, U6 small nuclear 76, ...
ENSG00000215604
729501
ZNF962P
zinc finger protein 962, p...
ENSG00000223024
100873763
RNU6-55P
RNA, U6 small nuclear 55, ...
ENSG00000225016
100874404
LINC00328-2P
long intergenic non-protei...
ENSG00000226361
283523
TERF1P5
TERF1 pseudogene 5 [Source...
ENSG00000227568
100419038
SNX18P26
sorting nexin 18 pseudogen...
ENSG00000227784
100132598
ZNF965P
zinc finger protein 965, p...
ENSG00000228797
729535
FAM207BP
family with sequence simil...
ENSG00000229788
100874153
LINC00388
long intergenic non-protei...
ENSG00000230931
100101111
GXYLT1P1
GXYLT1 pseudogene 1 [Sourc...
ENSG00000231238
100874135
LINC00349
long intergenic non-protei...
ENSG00000231914
100874152
LINC00387
long intergenic non-protei...
ENSG00000233905
100421799
LONRF2P2
LONRF2 pseudogene 2 [Sourc...
ENSG00000235500
400094
SNX19P2
sorting nexin 19 pseudogen...
ENSG00000235876
729524
FEM1AP4
fem-1 homolog A pseudogene...
ENSG00000242756
100462810
RHOT1P3
ras homolog family member ...
ENSG00000244155
100422247
CYP4F34P
cytochrome P450 family 4 s...
ENSG00000268486
ENSG00000270496
101927265
BNIP3P7
BCL2 interacting protein 3...
ENSG00000276183
124900632
U6
U6 spliceosomal RNA [Sourc...
ENSG00000279081
ENSG00000279124
122965330
IGSF3P1
IGSF3 pseudogene 1 [Source...
ENSG00000279231
ENSG00000279516
26080
FAM230C
family with sequence simil...
ENSG00000279730
57108
KMT5AP1
KMT5A pseudogene 1 [Source...
ENSG00000279924
ENSG00000280208
643171
GGT4P
gamma-glutamyltransferase ...
ENSG00000284679
ENSG00000290438
Version history
2023.1.Hs: Updated to Ensembl 109
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