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Human Gene Set: WP_TCA_CYCLE_IN_SENESCENCE
Standard name
WP_TCA_CYCLE_IN_SENESCENCE
Systematic name
M40058
Brief description
TCA cycle in senescence
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:WIKIPATHWAYS: WikiPathways
Source publication
Exact source
WP5050
Related gene sets
External links
https://www.wikipathways.org/instance/WP5050
Filtered by similarity
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Source species
Homo sapiens
Contributed by
WikiPathways
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 10 genes
Gene families
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Categorize
these 10 genes by gene family
Show members
(
show
10 source identifiers mapped to 10 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
2271
2271
FH
fumarate hydratase [Source:HGNC Symbol;Acc:HGNC...
2805
2805
GOT1
glutamic-oxaloacetic transaminase 1 [Source:HGN...
4190
4190
MDH1
malate dehydrogenase 1 [Source:HGNC Symbol;Acc:...
4199
4199
ME1
malic enzyme 1 [Source:HGNC Symbol;Acc:HGNC:6983]
4200
4200
ME2
malic enzyme 2 [Source:HGNC Symbol;Acc:HGNC:6984]
5160
5160
PDHA1
pyruvate dehydrogenase E1 subunit alpha 1 [Sour...
5163
5163
PDK1
pyruvate dehydrogenase kinase 1 [Source:HGNC Sy...
57546
57546
PDP2
pyruvate dehydrogenase phosphatase catalytic su...
673
673
BRAF
B-Raf proto-oncogene, serine/threonine kinase [...
7157
7157
TP53
tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:...
Version history
2024.1.Hs: Updated to WikiPathways Release 20240710
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.