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Human Gene Set: WP_SERINE_METABOLISM
Standard name
WP_SERINE_METABOLISM
Systematic name
M42556
Brief description
Serine metabolism
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:WIKIPATHWAYS: WikiPathways
Source publication
Exact source
WP4688
Related gene sets
External links
https://www.wikipathways.org/instance/WP4688
Filtered by similarity
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Source species
Homo sapiens
Contributed by
WikiPathways
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 8 genes
Gene families
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Categorize
these 8 genes by gene family
Show members
(
show
8 source identifiers mapped to 8 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
1719
1719
DHFR
dihydrofolate reductase [Source:HGNC Symbol;Acc...
26227
26227
PHGDH
phosphoglycerate dehydrogenase [Source:HGNC Sym...
29968
29968
PSAT1
phosphoserine aminotransferase 1 [Source:HGNC S...
5723
5723
PSPH
phosphoserine phosphatase [Source:HGNC Symbol;A...
63826
63826
SRR
serine racemase [Source:HGNC Symbol;Acc:HGNC:14...
6470
6470
SHMT1
serine hydroxymethyltransferase 1 [Source:HGNC ...
6472
6472
SHMT2
serine hydroxymethyltransferase 2 [Source:HGNC ...
7298
7298
TYMS
thymidylate synthetase [Source:HGNC Symbol;Acc:...
Version history
2024.1.Hs: Updated to WikiPathways Release 20240710
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