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Human Gene Set: WP_15Q112_COPY_NUMBER_VARIATION_SYNDROME
Standard name
WP_15Q112_COPY_NUMBER_VARIATION_SYNDROME
Systematic name
M39879
Brief description
15q11.2 copy number variation syndrome
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:WIKIPATHWAYS: WikiPathways
Source publication
Exact source
WP4940
Related gene sets
External links
https://www.wikipathways.org/instance/WP4940
Filtered by similarity
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Source species
Homo sapiens
Contributed by
WikiPathways
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 9 genes
Gene families
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Categorize
these 9 genes by gene family
Show members
(
show
9 source identifiers mapped to 9 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10426
10426
TUBGCP3
tubulin gamma complex component 3 [Source:H...
10844
10844
TUBGCP2
tubulin gamma complex component 2 [Source:H...
114791
114791
TUBGCP5
tubulin gamma complex component 5 [Source:H...
123606
123606
NIPA1
NIPA magnesium transporter 1 [Source:HGNC S...
23191
23191
CYFIP1
cytoplasmic FMR1 interacting protein 1 [Sou...
2332
2332
FMR1
fragile X messenger ribonucleoprotein 1 [So...
27229
27229
TUBGCP4
tubulin gamma complex component 4 [Source:H...
81614
81614
NIPA2
NIPA magnesium transporter 2 [Source:HGNC S...
85378
85378
TUBGCP6
tubulin gamma complex component 6 [Source:H...
Version history
2024.1.Hs: Renamed from WP_15Q11_2_COPY_NUMBER_VARIATION_SYNDROME. Updated to WikiPathways Release 20240710
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