Standard name |
SCHAEFFER_PROSTATE_DEVELOPMENT_AND_CANCER_BOX1_DN |
Systematic name |
M1355 |
Brief description |
Early prostate development genes (down-regulated at 6 h dihydrotestosterone [PubChem=10635]) which are also down-regulated in normal epithelium vs high grade prostatic intraepithelial neoplasia (PIN). |
Full description or abstract |
Cancer cells differentiate along specific lineages that largely determine their clinical and biologic behavior. Distinct cancer phenotypes from different cells and organs likely result from unique gene expression repertoires established in the embryo and maintained after malignant transformation. We used comprehensive gene expression analysis to examine this concept in the prostate, an organ with a tractable developmental program and a high propensity for cancer. We focused on gene expression in the murine prostate rudiment at three time points during the first 48 h of exposure to androgen, which initiates proliferation and invasion of prostate epithelial buds into surrounding urogenital sinus mesenchyme. Here, we show that androgen exposure regulates genes previously implicated in prostate carcinogenesis comprising pathways for the phosphatase and tensin homolog (PTEN), fibroblast growth factor (FGF)/mitogen-activated protein kinase (MAPK), and Wnt signaling along with cellular programs regulating such 'hallmarks' of cancer as angiogenesis, apoptosis, migration and proliferation. We found statistically significant evidence for novel androgen-induced gene regulation events that establish and/or maintain prostate cell fate. These include modulation of gene expression through microRNAs, expression of specific transcription factors, and regulation of their predicted targets. By querying public gene expression databases from other tissues, we found that rather than generally characterizing androgen exposure or epithelial budding, the early prostate development program more closely resembles the program for human prostate cancer. Most importantly, early androgen-regulated genes and functional themes associated with prostate development were highly enriched in contrasts between increasingly lethal forms of prostate cancer, confirming a 'reactivation' of embryonic pathways for proliferation and invasion in prostate cancer progression. Among the genes with the most significant links to the development and cancer, we highlight coordinate induction of the transcription factor Sox9 and suppression of the proapoptotic phospholipid-binding protein Annexin A1 that link early prostate development to early prostate carcinogenesis. These results credential early prostate development as a reliable and valid model system for the investigation of genes and pathways that drive prostate cancer. |
Collection |
C2: Curated CGP: Chemical and Genetic Perturbations |
Source publication |
Pubmed 18794802 Authors: Schaeffer EM,Marchionni L,Huang Z,Simons B,Blackman A,Yu W,Parmigiani G,Berman DM |
Exact source |
Table 13S |
Related gene sets |
(show 18 additional gene sets from the source publication)
(show 9 gene sets from the same authors)
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External links |
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Source species |
Mus musculus |
Contributed by |
Jessica Robertson (MSigDB Team) |
Source platform or identifier namespace |
MOUSE_GENE_SYMBOL |
Dataset references |
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GTEx compendium
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NCI-60 cell lines (National Cancer Institute)
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 10 genes
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10 genes by gene family
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(show 10 source identifiers mapped to 10 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
Aff3 |
3899 |
AFF3 |
ALF transcription elongation factor 3 [Sour... |
B2m |
567 |
B2M |
beta-2-microglobulin [Source:HGNC Symbol;Ac... |
Calr |
811 |
CALR |
calreticulin [Source:HGNC Symbol;Acc:HGNC:1... |
Cldnd1 |
56650 |
CLDND1 |
claudin domain containing 1 [Source:HGNC Sy... |
Prkcbp1 |
23613 |
ZMYND8 |
zinc finger MYND-type containing 8 [Source:... |
Sart1 |
9092 |
SART1 |
spliceosome associated factor 1, recruiter ... |
Sdpr |
8436 |
CAVIN2 |
caveolae associated protein 2 [Source:HGNC ... |
Serinc3 |
10955 |
SERINC3 |
serine incorporator 3 [Source:HGNC Symbol;A... |
Snrp70 |
6625 |
SNRNP70 |
small nuclear ribonucleoprotein U1 subunit ... |
Syt13 |
57586 |
SYT13 |
synaptotagmin 13 [Source:HGNC Symbol;Acc:HG... |
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Version history |
3.1: First introduced
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