login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: REACTOME_REGULATION_OF_CDH11_GENE_TRANSCRIPTION
Standard name
REACTOME_REGULATION_OF_CDH11_GENE_TRANSCRIPTION
Systematic name
M48016
Brief description
Regulation of CDH11 gene transcription
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:REACTOME: Reactome Pathways
Source publication
Exact source
R-HSA-9762293
Related gene sets
External links
https://www.reactome.org/content/detail/R-HSA-9762293
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Reactome
Source platform or
identifier namespace
Human_Ensembl_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 10 genes
Gene families
?
Categorize
these 10 genes by gene family
Show members
(
show
10 source identifiers mapped to 10 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ENSG00000037965
3224
HOXC8
homeobox C8 [Source:HGNC Symbol;Acc...
ENSG00000103241
2294
FOXF1
forkhead box F1 [Source:HGNC Symbol...
ENSG00000124216
6615
SNAI1
snail family transcriptional repres...
ENSG00000129351
3609
ILF3
interleukin enhancer binding factor...
ENSG00000140937
1009
CDH11
cadherin 11 [Source:HGNC Symbol;Acc...
ENSG00000152784
56978
PRDM8
PR/SET domain 8 [Source:HGNC Symbol...
ENSG00000163909
26508
HEYL
hes related family bHLH transcripti...
ENSG00000169554
9839
ZEB2
zinc finger E-box binding homeobox ...
ENSG00000180828
27319
BHLHE22
basic helix-loop-helix family membe...
ENSG00000185591
6667
SP1
Sp1 transcription factor [Source:HG...
Version history
2024.1.Hs: Updated to Reactome v89
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.