Human Gene Set: PAX8_B


Standard name PAX8_B
Systematic name M12142
Brief description Genes having at least one occurrence of the motif NCNNTNNTGCRTGANNNN in the regions spanning 4 kb centered on their transcription starting sites [-2kb, +2kb]. This matches the PAX8 [GeneSymbol=PAX8] transcription factor binding site V$PAX8_B (v7.4 TRANSFAC).
Full description or abstract  
Collection C3: Regulatory Target
      TFT: Transcription Factor Targets
            TFT:TFT_LEGACY: TFT_Legacy
Source publication  
Exact source  
Related gene sets  
External links
Filtered by similarity ?
Source species Homo sapiens
Contributed by Xiaohui Xie (Broad Institute)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 106 genes
Gene families ? Categorize these 106 genes by gene family
Show members (show 108 source identifiers mapped to 106 genes)
Version history 7.1: Moved to TFT_Legacy sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.