Human Gene Set: MODY_HIPPOCAMPUS_PRENATAL

For the Mouse gene set with the same name, see MODY_HIPPOCAMPUS_PRENATAL

Standard name MODY_HIPPOCAMPUS_PRENATAL
Systematic name M5316
Brief description Genes highly expressed in prenatal hippocampus (cluster 1).
Full description or abstract We have analyzed the developmental molecular programs of the mouse hippocampus, a cortical structure critical for learning and memory, by means of large-scale DNA microarray techniques. Of 11,000 genes and expressed sequence tags examined, 1,926 showed dynamic changes during hippocampal development from embryonic day 16 to postnatal day 30. Gene-cluster analysis was used to group these genes into 16 distinct clusters with striking patterns that appear to correlate with major developmental hallmarks and cellular events. These include genes involved in neuronal proliferation, differentiation, and synapse formation. A complete list of the transcriptional changes has been compiled into a comprehensive gene profile database (http://BrainGenomics.Princeton.edu), which should prove valuable in advancing our understanding of the molecular and genetic programs underlying both the development and the functions of the mammalian brain.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 11438693   Authors: Mody M,Cao Y,Cui Z,Tay KY,Shyong A,Shimizu E,Pham K,Schultz P,Welsh D,Tsien JZ
Exact source Table 1S
Related gene sets (show 2 additional gene sets from the source publication)

(show 9 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by John Newman (University of Washington)
Source platform or
identifier namespace		 AFFY_Mu11K
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 45 genes
Gene families ? Categorize these 45 genes by gene family
Show members (show 50 source identifiers mapped to 45 genes)
Version history 3.0: Renamed from HIPPOCAMPUS_DEVELOPMENT_PRENATAL

See MSigDB license terms here. Please note that certain gene sets have special access terms.