login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: MODULE_50
Standard name
MODULE_50
Systematic name
M922
Brief description
Genes in the cancer module 50.
Full description or abstract
Collection
C4: Computational
CM: Cancer Modules
Source publication
Exact source
module_50
Related gene sets
External links
http://robotics.stanford.edu/~erans/cancer/modules/module_50
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Aviv Regev (Broad Institute)
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 13 genes
Gene families
?
Categorize
these 13 genes by gene family
Show members
(
show
13 source identifiers mapped to 13 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
5682
5682
PSMA1
proteasome 20S subunit alpha 1 [Source:HGNC Symb...
5683
5683
PSMA2
proteasome 20S subunit alpha 2 [Source:HGNC Symb...
5684
5684
PSMA3
proteasome 20S subunit alpha 3 [Source:HGNC Symb...
5685
5685
PSMA4
proteasome 20S subunit alpha 4 [Source:HGNC Symb...
5686
5686
PSMA5
proteasome 20S subunit alpha 5 [Source:HGNC Symb...
5688
5688
PSMA7
proteasome 20S subunit alpha 7 [Source:HGNC Symb...
5689
5689
PSMB1
proteasome 20S subunit beta 1 [Source:HGNC Symbo...
5690
5690
PSMB2
proteasome 20S subunit beta 2 [Source:HGNC Symbo...
5691
5691
PSMB3
proteasome 20S subunit beta 3 [Source:HGNC Symbo...
5692
5692
PSMB4
proteasome 20S subunit beta 4 [Source:HGNC Symbo...
5693
5693
PSMB5
proteasome 20S subunit beta 5 [Source:HGNC Symbo...
5695
5695
PSMB7
proteasome 20S subunit beta 7 [Source:HGNC Symbo...
5699
5699
PSMB10
proteasome 20S subunit beta 10 [Source:HGNC Symb...
Version history
3.1: module_50
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.