Standard name |
KEGG_O_GLYCAN_BIOSYNTHESIS |
Systematic name |
M6929 |
Brief description |
O-Glycan biosynthesis |
Full description or abstract |
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine. |
Collection |
C2: Curated CP: Canonical Pathways CP:KEGG_LEGACY: KEGG Legacy Pathways |
Source publication |
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Exact source |
hsa00512 |
Related gene sets |
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External links |
http://www.genome.jp/pathway/hsa00512
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Filtered by similarity ?
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Source species |
Homo sapiens |
Contributed by |
KEGG (Kyoto Encyclopedia of Genes and Genomes) |
Source platform or identifier namespace |
Human_NCBI_Gene_ID |
Dataset references |
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Compendia expression profiles ? |
NG-CHM interactive heatmaps
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NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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Advanced query |
Further investigate
these 30 genes
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Gene families ? |
Categorize these
30 genes by gene family
|
Show members |
(show 30 source identifiers mapped to 30 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
11226 |
11226 |
GALNT6 |
polypeptide N-acetylgalactosaminyltransf... |
11227 |
11227 |
GALNT5 |
polypeptide N-acetylgalactosaminyltransf... |
114805 |
114805 |
GALNT13 |
polypeptide N-acetylgalactosaminyltransf... |
117248 |
117248 |
GALNT15 |
polypeptide N-acetylgalactosaminyltransf... |
168391 |
168391 |
GALNTL5 |
polypeptide N-acetylgalactosaminyltransf... |
192134 |
192134 |
B3GNT6 |
UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc... |
2589 |
2589 |
GALNT1 |
polypeptide N-acetylgalactosaminyltransf... |
2590 |
2590 |
GALNT2 |
polypeptide N-acetylgalactosaminyltransf... |
2591 |
2591 |
GALNT3 |
polypeptide N-acetylgalactosaminyltransf... |
26290 |
26290 |
GALNT8 |
polypeptide N-acetylgalactosaminyltransf... |
2650 |
2650 |
GCNT1 |
glucosaminyl (N-acetyl) transferase 1 [S... |
29071 |
29071 |
C1GALT1C1 |
C1GALT1 specific chaperone 1 [Source:HGN... |
374378 |
374378 |
GALNT18 |
polypeptide N-acetylgalactosaminyltransf... |
442117 |
442117 |
GALNTL6 |
polypeptide N-acetylgalactosaminyltransf... |
50614 |
50614 |
GALNT9 |
polypeptide N-acetylgalactosaminyltransf... |
51301 |
51301 |
GCNT4 |
glucosaminyl (N-acetyl) transferase 4 [S... |
51809 |
51809 |
GALNT7 |
polypeptide N-acetylgalactosaminyltransf... |
55568 |
55568 |
GALNT10 |
polypeptide N-acetylgalactosaminyltransf... |
55808 |
55808 |
ST6GALNAC1 |
ST6 N-acetylgalactosaminide alpha-2,6-si... |
56913 |
56913 |
C1GALT1 |
core 1 synthase, glycoprotein-N-acetylga... |
57452 |
57452 |
GALNT16 |
polypeptide N-acetylgalactosaminyltransf... |
63917 |
63917 |
GALNT11 |
polypeptide N-acetylgalactosaminyltransf... |
64409 |
64409 |
GALNT17 |
polypeptide N-acetylgalactosaminyltransf... |
6482 |
6482 |
ST3GAL1 |
ST3 beta-galactoside alpha-2,3-sialyltra... |
6483 |
6483 |
ST3GAL2 |
ST3 beta-galactoside alpha-2,3-sialyltra... |
79623 |
79623 |
GALNT14 |
polypeptide N-acetylgalactosaminyltransf... |
79695 |
79695 |
GALNT12 |
polypeptide N-acetylgalactosaminyltransf... |
8693 |
8693 |
GALNT4 |
polypeptide N-acetylgalactosaminyltransf... |
9245 |
9245 |
GCNT3 |
glucosaminyl (N-acetyl) transferase 3, m... |
9334 |
9334 |
B4GALT5 |
beta-1,4-galactosyltransferase 5 [Source... |
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Version history |
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The content of the gene sets in the KEGG_LEGACY collection has not been updated since KEGG
restricted their usage terms in 2011. More recent sets are available in the KEGG_MEDICUS
collection, derived from KEGG's openly available MEDICUS subset.