Standard name |
KEGG_MISMATCH_REPAIR |
Systematic name |
M13515 |
Brief description |
Mismatch repair |
Full description or abstract |
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems. The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick. |
Collection |
C2: Curated CP: Canonical Pathways CP:KEGG_LEGACY: KEGG Legacy Pathways |
Source publication |
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Exact source |
hsa03430 |
Related gene sets |
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External links |
http://www.genome.jp/pathway/hsa03430
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Filtered by similarity ?
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Source species |
Homo sapiens |
Contributed by |
KEGG (Kyoto Encyclopedia of Genes and Genomes) |
Source platform or identifier namespace |
Human_NCBI_Gene_ID |
Dataset references |
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 23 genes
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23 genes by gene family
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Show members |
(show 23 source identifiers mapped to 23 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
10714 |
10714 |
POLD3 |
DNA polymerase delta 3, accessory subunit [Sour... |
27030 |
27030 |
MLH3 |
mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128] |
2956 |
2956 |
MSH6 |
mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329] |
29935 |
29935 |
RPA4 |
replication protein A4 [Source:HGNC Symbol;Acc:... |
3978 |
3978 |
LIG1 |
DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598] |
4292 |
4292 |
MLH1 |
mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127] |
4436 |
4436 |
MSH2 |
mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325] |
4437 |
4437 |
MSH3 |
mutS homolog 3 [Source:HGNC Symbol;Acc:HGNC:7326] |
5111 |
5111 |
PCNA |
proliferating cell nuclear antigen [Source:HGNC... |
5395 |
5395 |
PMS2 |
PMS1 homolog 2, mismatch repair system componen... |
5424 |
5424 |
POLD1 |
DNA polymerase delta 1, catalytic subunit [Sour... |
5425 |
5425 |
POLD2 |
DNA polymerase delta 2, accessory subunit [Sour... |
57804 |
57804 |
POLD4 |
DNA polymerase delta 4, accessory subunit [Sour... |
5981 |
5981 |
RFC1 |
replication factor C subunit 1 [Source:HGNC Sym... |
5982 |
5982 |
RFC2 |
replication factor C subunit 2 [Source:HGNC Sym... |
5983 |
5983 |
RFC3 |
replication factor C subunit 3 [Source:HGNC Sym... |
5984 |
5984 |
RFC4 |
replication factor C subunit 4 [Source:HGNC Sym... |
5985 |
5985 |
RFC5 |
replication factor C subunit 5 [Source:HGNC Sym... |
6117 |
6117 |
RPA1 |
replication protein A1 [Source:HGNC Symbol;Acc:... |
6118 |
6118 |
RPA2 |
replication protein A2 [Source:HGNC Symbol;Acc:... |
6119 |
6119 |
RPA3 |
replication protein A3 [Source:HGNC Symbol;Acc:... |
6742 |
6742 |
SSBP1 |
single stranded DNA binding protein 1 [Source:H... |
9156 |
9156 |
EXO1 |
exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511] |
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Version history |
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The content of the gene sets in the KEGG_LEGACY collection has not been updated since KEGG
restricted their usage terms in 2011. More recent sets are available in the KEGG_MEDICUS
collection, derived from KEGG's openly available MEDICUS subset.