login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: KEGG_MEDICUS_REFERENCE_TETHERING_OF_LATE_ENDOSOMES_AND_LYSOSOMES
Standard name
KEGG_MEDICUS_REFERENCE_TETHERING_OF_LATE_ENDOSOMES_AND_LYSOSOMES
Systematic name
M47776
Brief description
Pathway Definition from KEGG: ARL8B == PLEKHM1 == RAB7 == HOPS
Full description or abstract
Tethering of late endosomes and lysosomes. Pathway ID: N01300. Pathway type: Reference. Pathway class: nt06125 Membrane trafficking (bacteria).
Collection
C2: Curated
CP: Canonical Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
Source publication
Exact source
N01300
Related gene sets
External links
https://www.kegg.jp/entry/N01300
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
KEGG (Kyoto Encyclopedia of Genes and Genomes)
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 10 genes
Gene families
?
Categorize
these 10 genes by gene family
Show members
(
show
10 source identifiers mapped to 10 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
23339
23339
VPS39
VPS39 subunit of HOPS complex [Source:HGNC ...
27072
27072
VPS41
VPS41 subunit of HOPS complex [Source:HGNC ...
338382
338382
RAB7B
RAB7B, member RAS oncogene family [Source:H...
55207
55207
ARL8B
ADP ribosylation factor like GTPase 8B [Sou...
55823
55823
VPS11
VPS11 core subunit of CORVET and HOPS compl...
57617
57617
VPS18
VPS18 core subunit of CORVET and HOPS compl...
64601
64601
VPS16
VPS16 core subunit of CORVET and HOPS compl...
65082
65082
VPS33A
VPS33A core subunit of CORVET and HOPS comp...
7879
7879
RAB7A
RAB7A, member RAS oncogene family [Source:H...
9842
9842
PLEKHM1
pleckstrin homology and RUN domain containi...
Version history
2024.1.Hs: Updated to network file downloaded on 2024-05-375
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.