login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: KEGG_MEDICUS_REFERENCE_COPII_VESICLE_FORMATION
Standard name
KEGG_MEDICUS_REFERENCE_COPII_VESICLE_FORMATION
Systematic name
M47770
Brief description
Pathway Definition from KEGG: SEC12 -> SAR1 == (SEC23+SEC24) == (SEC13+SEC31)
Full description or abstract
COPII vesicle formation. Pathway ID: N01289. Pathway type: Reference. Pathway class: nt06125 Membrane trafficking (bacteria).
Collection
C2: Curated
CP: Canonical Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
Source publication
Exact source
N01289
Related gene sets
External links
https://www.kegg.jp/entry/N01289
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
KEGG (Kyoto Encyclopedia of Genes and Genomes)
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 12 genes
Gene families
?
Categorize
these 12 genes by gene family
Show members
(
show
12 source identifiers mapped to 12 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10113
10113
PREB
prolactin regulatory element binding [Source:H...
10427
10427
SEC24B
SEC24 homolog B, COPII coat complex component ...
10483
10483
SEC23B
SEC23 homolog B, COPII coat complex component ...
10484
10484
SEC23A
SEC23 homolog A, COPII coat complex component ...
10802
10802
SEC24A
SEC24 homolog A, COPII coat complex component ...
22872
22872
SEC31A
SEC31 homolog A, COPII coat complex component ...
25956
25956
SEC31B
SEC31 homolog B, COPII coat complex component ...
51128
51128
SAR1B
secretion associated Ras related GTPase 1B [So...
56681
56681
SAR1A
secretion associated Ras related GTPase 1A [So...
6396
6396
SEC13
SEC13 homolog, nuclear pore and COPII coat com...
9632
9632
SEC24C
SEC24 homolog C, COPII coat complex component ...
9871
9871
SEC24D
SEC24 homolog D, COPII coat complex component ...
Version history
2024.1.Hs: Updated to network file downloaded on 2024-05-16
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.