Standard name |
KEGG_HOMOLOGOUS_RECOMBINATION |
Systematic name |
M11675 |
Brief description |
Homologous recombination |
Full description or abstract |
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR. |
Collection |
C2: Curated CP: Canonical Pathways CP:KEGG_LEGACY: KEGG Legacy Pathways |
Source publication |
|
Exact source |
hsa03440 |
Related gene sets |
|
External links |
http://www.genome.jp/pathway/hsa03440
|
Filtered by similarity ?
|
|
Source species |
Homo sapiens |
Contributed by |
KEGG (Kyoto Encyclopedia of Genes and Genomes) |
Source platform or identifier namespace |
Human_NCBI_Gene_ID |
Dataset references |
|
Download gene set |
format: grp | gmt | xml | json | TSV metadata |
Compute overlaps ? |
(show collections to investigate for overlap with this gene set)
|
Compendia expression profiles ? |
NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
|
Advanced query |
Further investigate
these 28 genes
|
Gene families ? |
Categorize these
28 genes by gene family
|
Show members |
(show 28 source identifiers mapped to 28 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
10111 |
10111 |
RAD50 |
RAD50 double strand break repair protein [So... |
10714 |
10714 |
POLD3 |
DNA polymerase delta 3, accessory subunit [S... |
146956 |
146956 |
EME1 |
essential meiotic structure-specific endonuc... |
25788 |
25788 |
RAD54B |
RAD54 homolog B [Source:HGNC Symbol;Acc:HGNC... |
29935 |
29935 |
RPA4 |
replication protein A4 [Source:HGNC Symbol;A... |
4361 |
4361 |
MRE11 |
MRE11 homolog, double strand break repair nu... |
4683 |
4683 |
NBN |
nibrin [Source:HGNC Symbol;Acc:HGNC:7652] |
5424 |
5424 |
POLD1 |
DNA polymerase delta 1, catalytic subunit [S... |
5425 |
5425 |
POLD2 |
DNA polymerase delta 2, accessory subunit [S... |
57804 |
57804 |
POLD4 |
DNA polymerase delta 4, accessory subunit [S... |
5888 |
5888 |
RAD51 |
RAD51 recombinase [Source:HGNC Symbol;Acc:HG... |
5889 |
5889 |
RAD51C |
RAD51 paralog C [Source:HGNC Symbol;Acc:HGNC... |
5890 |
5890 |
RAD51B |
RAD51 paralog B [Source:HGNC Symbol;Acc:HGNC... |
5892 |
5892 |
RAD51D |
RAD51 paralog D [Source:HGNC Symbol;Acc:HGNC... |
5893 |
5893 |
RAD52 |
RAD52 homolog, DNA repair protein [Source:HG... |
6117 |
6117 |
RPA1 |
replication protein A1 [Source:HGNC Symbol;A... |
6118 |
6118 |
RPA2 |
replication protein A2 [Source:HGNC Symbol;A... |
6119 |
6119 |
RPA3 |
replication protein A3 [Source:HGNC Symbol;A... |
641 |
641 |
BLM |
BLM RecQ like helicase [Source:HGNC Symbol;A... |
6742 |
6742 |
SSBP1 |
single stranded DNA binding protein 1 [Sourc... |
675 |
675 |
BRCA2 |
BRCA2 DNA repair associated [Source:HGNC Sym... |
7156 |
7156 |
TOP3A |
DNA topoisomerase III alpha [Source:HGNC Sym... |
7516 |
7516 |
XRCC2 |
X-ray repair cross complementing 2 [Source:H... |
7517 |
7517 |
XRCC3 |
X-ray repair cross complementing 3 [Source:H... |
7979 |
7979 |
SEM1 |
SEM1 26S proteasome subunit [Source:HGNC Sym... |
80198 |
80198 |
MUS81 |
MUS81 structure-specific endonuclease subuni... |
8438 |
8438 |
RAD54L |
RAD54 like [Source:HGNC Symbol;Acc:HGNC:9826] |
8940 |
8940 |
TOP3B |
DNA topoisomerase III beta [Source:HGNC Symb... |
|
Version history |
|
The content of the gene sets in the KEGG_LEGACY collection has not been updated since KEGG
restricted their usage terms in 2011. More recent sets are available in the KEGG_MEDICUS
collection, derived from KEGG's openly available MEDICUS subset.