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Human Gene Set: HP_TYPICALLY_DE_NOVO
Standard name
HP_TYPICALLY_DE_NOVO
Systematic name
M41489
Brief description
Typically de novo
Full description or abstract
Description of conditions that are exclusively or predominantly observed to display de novo variants. In some cases, this may be due to the limited reproductive fitness of affected individuals. [PMID:22805709]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0025352
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0025352
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
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gmt
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xml
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json
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 12 genes
Gene families
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Categorize
these 12 genes by gene family
Show members
(
show
12 source identifiers mapped to 12 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10501
10501
SEMA6B
semaphorin 6B [Source:HGNC Symbol;Acc:HGNC:10...
1822
1822
ATN1
atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
23250
23250
ATP11A
ATPase phospholipid transporting 11A [Source:...
27102
27102
EIF2AK1
eukaryotic translation initiation factor 2 al...
2783
2783
GNB2
G protein subunit beta 2 [Source:HGNC Symbol;...
51341
51341
ZBTB7A
zinc finger and BTB domain containing 7A [Sou...
5290
5290
PIK3CA
phosphatidylinositol-4,5-bisphosphate 3-kinas...
5296
5296
PIK3R2
phosphoinositide-3-kinase regulatory subunit ...
5430
5430
POLR2A
RNA polymerase II subunit A [Source:HGNC Symb...
5594
5594
MAPK1
mitogen-activated protein kinase 1 [Source:HG...
57680
57680
CHD8
chromodomain helicase DNA binding protein 8 [...
58508
58508
KMT2C
lysine methyltransferase 2C [Source:HGNC Symb...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
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