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Human Gene Set: HP_SENILE_PLAQUES
Standard name
HP_SENILE_PLAQUES
Systematic name
M38670
Brief description
Senile plaques
Full description or abstract
Senile plaques are extracellular deposits of amyloid in the gray matter of the brain. [https://orcid.org/0009-0006-4530-3154]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0100256
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0100256
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
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gmt
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xml
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json
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TSV metadata
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 11 genes
Gene families
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Categorize
these 11 genes by gene family
Show members
(
show
11 source identifiers mapped to 11 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10347
10347
ABCA7
ATP binding cassette subfamily A member 7 [S...
25978
25978
CHMP2B
charged multivesicular body protein 2B [Sour...
2896
2896
GRN
granulin precursor [Source:HGNC Symbol;Acc:H...
348
348
APOE
apolipoprotein E [Source:HGNC Symbol;Acc:HGN...
4137
4137
MAPT
microtubule associated protein tau [Source:H...
54209
54209
TREM2
triggering receptor expressed on myeloid cel...
54664
54664
TMEM106B
transmembrane protein 106B [Source:HGNC Symb...
5621
5621
PRNP
prion protein [Source:HGNC Symbol;Acc:HGNC:9...
5663
5663
PSEN1
presenilin 1 [Source:HGNC Symbol;Acc:HGNC:9508]
5664
5664
PSEN2
presenilin 2 [Source:HGNC Symbol;Acc:HGNC:9509]
7415
7415
VCP
valosin containing protein [Source:HGNC Symb...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
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