login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: HP_MYOFIBRILLAR_MYOPATHY
Standard name
HP_MYOFIBRILLAR_MYOPATHY
Systematic name
M36387
Brief description
Myofibrillar myopathy
Full description or abstract
Myofibrillar structural changes characterized by abnormal intracellular accumulation of the intermediate filament desmin and other proteins. [https://orcid.org/0000-0002-0736-9199]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0003715
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0003715
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 11 genes
Gene families
?
Categorize
these 11 genes by gene family
Show members
(
show
11 source identifiers mapped to 11 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10049
10049
DNAJB6
DnaJ heat shock protein family (Hsp40) membe...
11155
11155
LDB3
LIM domain binding 3 [Source:HGNC Symbol;Acc...
131377
131377
KLHL40
kelch like family member 40 [Source:HGNC Sym...
207
207
AKT1
AKT serine/threonine kinase 1 [Source:HGNC S...
2273
2273
FHL1
four and a half LIM domains 1 [Source:HGNC S...
2318
2318
FLNC
filamin C [Source:HGNC Symbol;Acc:HGNC:3756]
5728
5728
PTEN
phosphatase and tensin homolog [Source:HGNC ...
58
58
ACTA1
actin alpha 1, skeletal muscle [Source:HGNC ...
7273
7273
TTN
titin [Source:HGNC Symbol;Acc:HGNC:12403]
9499
9499
MYOT
myotilin [Source:HGNC Symbol;Acc:HGNC:12399]
9531
9531
BAG3
BAG cochaperone 3 [Source:HGNC Symbol;Acc:HG...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.