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Human Gene Set: HP_KNEE_OSTEOARTHRITIS
Standard name
HP_KNEE_OSTEOARTHRITIS
Systematic name
M43303
Brief description
Knee osteoarthritis
Full description or abstract
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0005086
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0005086
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
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gmt
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xml
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json
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 15 genes
Gene families
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Categorize
these 15 genes by gene family
Show members
(
show
15 source identifiers mapped to 15 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
10216
10216
PRG4
proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:9...
1280
1280
COL2A1
collagen type II alpha 1 chain [Source:HGNC S...
1298
1298
COL9A2
collagen type IX alpha 2 chain [Source:HGNC S...
1301
1301
COL11A1
collagen type XI alpha 1 chain [Source:HGNC S...
26191
26191
PTPN22
protein tyrosine phosphatase non-receptor typ...
3559
3559
IL2RA
interleukin 2 receptor subunit alpha [Source:...
3560
3560
IL2RB
interleukin 2 receptor subunit beta [Source:H...
4087
4087
SMAD2
SMAD family member 2 [Source:HGNC Symbol;Acc:...
4088
4088
SMAD3
SMAD family member 3 [Source:HGNC Symbol;Acc:...
4322
4322
MMP13
matrix metallopeptidase 13 [Source:HGNC Symbo...
5771
5771
PTPN2
protein tyrosine phosphatase non-receptor typ...
6399
6399
TRAPPC2
trafficking protein particle complex subunit ...
6775
6775
STAT4
signal transducer and activator of transcript...
79722
79722
ANKRD55
ankyrin repeat domain 55 [Source:HGNC Symbol;...
919
919
CD247
CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
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