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Human Gene Set: HP_GRANULOMA
Standard name
HP_GRANULOMA
Systematic name
M46316
Brief description
Granuloma
Full description or abstract
A compact, organized collection of mature mononuclear phagocytes, which may be but is not necessarily accompanied by accessory features such as necrosis. [PMID:10908370, PMID:11168676, PMID:937513]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0032252
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0032252
Filtered by similarity
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Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 8 genes
Gene families
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Categorize
these 8 genes by gene family
Show members
(
show
8 source identifiers mapped to 8 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
1536
1536
CYBB
cytochrome b-245 beta chain [Source:HGNC Symbo...
1777
1777
DNASE2
deoxyribonuclease 2, lysosomal [Source:HGNC Sy...
1794
1794
DOCK2
dedicator of cytokinesis 2 [Source:HGNC Symbol...
3394
3394
IRF8
interferon regulatory factor 8 [Source:HGNC Sy...
4763
4763
NF1
neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7...
5294
5294
PIK3CG
phosphatidylinositol-4,5-bisphosphate 3-kinase...
54
54
ACP5
acid phosphatase 5, tartrate resistant [Source...
79415
79415
CYBC1
cytochrome b-245 chaperone 1 [Source:HGNC Symb...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
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