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Human Gene Set: HP_CHRONIC_CSF_LYMPHOCYTOSIS
Standard name
HP_CHRONIC_CSF_LYMPHOCYTOSIS
Systematic name
M48778
Brief description
Chronic CSF lymphocytosis
Full description or abstract
Chronic cerebrospinal fluid (CSF) lymphocytosis is defined as the finding, in at least two serial CSF examinations, of more than 5 cells per cubic millimeter. [https://orcid.org/0000-0002-0736-9199]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0009704
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0009704
Filtered by similarity
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1 similar ontology term(s) from the external resource)
External ID
External Name
HP:0009709
Increased CSF interferon alpha
Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
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grp
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gmt
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TSV metadata
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 9 genes
Gene families
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these 9 genes by gene family
Show members
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9 source identifiers mapped to 9 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
100147744
100147744
RNU7-1
RNA, U7 small nuclear 1 [Source:HGNC...
103
103
ADAR
adenosine deaminase RNA specific [So...
10535
10535
RNASEH2A
ribonuclease H2 subunit A [Source:HG...
11277
11277
TREX1
three prime repair exonuclease 1 [So...
134353
134353
LSM11
LSM11, U7 small nuclear RNA associat...
25939
25939
SAMHD1
SAM and HD domain containing deoxynu...
64135
64135
IFIH1
interferon induced with helicase C d...
79621
79621
RNASEH2B
ribonuclease H2 subunit B [Source:HG...
84153
84153
RNASEH2C
ribonuclease H2 subunit C [Source:HG...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
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