login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: HP_CHOKING_EPISODES
Standard name
HP_CHOKING_EPISODES
Systematic name
M38415
Brief description
Choking episodes
Full description or abstract
Incidents in which a piece of food or other objects get stuck in the upper airway and provoke coughing, gagging, inability to talk, and difficulty breathing. [https://orcid.org/0000-0002-0736-9199]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0030842
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0030842
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 17 genes
Gene families
?
Categorize
these 17 genes by gene family
Show members
(
show
17 source identifiers mapped to 17 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
1103
1103
CHAT
choline O-acetyltransferase [Source:HGNC Sy...
127833
127833
SYT2
synaptotagmin 2 [Source:HGNC Symbol;Acc:HGN...
1305
1305
COL13A1
collagen type XIII alpha 1 chain [Source:HG...
1759
1759
DNM1
dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
3064
3064
HTT
huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]
374879
374879
ZNF699
zinc finger protein 699 [Source:HGNC Symbol...
375790
375790
AGRN
agrin [Source:HGNC Symbol;Acc:HGNC:329]
4649
4649
MYO9A
myosin IXA [Source:HGNC Symbol;Acc:HGNC:7608]
60482
60482
SLC5A7
solute carrier family 5 member 7 [Source:HG...
6329
6329
SCN4A
sodium voltage-gated channel alpha subunit ...
6515
6515
SLC2A3
solute carrier family 2 member 3 [Source:HG...
6572
6572
SLC18A3
solute carrier family 18 member A3 [Source:...
6576
6576
SLC25A1
solute carrier family 25 member 1 [Source:H...
6616
6616
SNAP25
synaptosome associated protein 25 [Source:H...
6843
6843
VAMP1
vesicle associated membrane protein 1 [Sour...
773
773
CACNA1A
calcium voltage-gated channel subunit alpha...
8398
8398
PLA2G6
phospholipase A2 group VI [Source:HGNC Symb...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.