login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: HP_ABNORMAL_LIGHT_ADAPTED_ELECTRORETINOGRAM
Standard name
HP_ABNORMAL_LIGHT_ADAPTED_ELECTRORETINOGRAM
Systematic name
M41360
Brief description
Abnormal light-adapted electroretinogram
Full description or abstract
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0008275
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0008275
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 11 genes
Gene families
?
Categorize
these 11 genes by gene family
Show members
(
show
11 source identifiers mapped to 11 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
1261
1261
CNGA3
cyclic nucleotide gated channel subunit alpha...
22926
22926
ATF6
activating transcription factor 6 [Source:HGN...
2780
2780
GNAT2
G protein subunit alpha transducin 2 [Source:...
5146
5146
PDE6C
phosphodiesterase 6C [Source:HGNC Symbol;Acc:...
5149
5149
PDE6H
phosphodiesterase 6H [Source:HGNC Symbol;Acc:...
5193
5193
PEX12
peroxisomal biogenesis factor 12 [Source:HGNC...
54714
54714
CNGB3
cyclic nucleotide gated channel subunit beta ...
6103
6103
RPGR
retinitis pigmentosa GTPase regulator [Source...
611
611
OPN1SW
opsin 1, short wave sensitive [Source:HGNC Sy...
778
778
CACNA1F
calcium voltage-gated channel subunit alpha1 ...
9371
9371
KIF3B
kinesin family member 3B [Source:HGNC Symbol;...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.