login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: HP_ABNORMAL_CERVICAL_CURVATURE
Standard name
HP_ABNORMAL_CERVICAL_CURVATURE
Systematic name
M36772
Brief description
Abnormal cervical curvature
Full description or abstract
The presence of an abnormal curvature of the cervical vertebral column. [https://orcid.org/0000-0002-0736-9199]
Collection
C5: Ontology
HPO: Human Phenotype Ontology
Source publication
Exact source
HP:0005905
Related gene sets
External links
https://hpo.jax.org/app/browse/term/HP:0005905
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
Human Phenotype Ontology Group (The Jackson Laboratory (JAX))
Source platform or
identifier namespace
Human_NCBI_Gene_ID
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 12 genes
Gene families
?
Categorize
these 12 genes by gene family
Show members
(
show
12 source identifiers mapped to 12 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
113189
113189
CHST14
carbohydrate sulfotransferase 14 [Source:HG...
1134
1134
CHRNA1
cholinergic receptor nicotinic alpha 1 subu...
1144
1144
CHRND
cholinergic receptor nicotinic delta subuni...
1146
1146
CHRNG
cholinergic receptor nicotinic gamma subuni...
134701
134701
RIPPLY2
ripply transcriptional repressor 2 [Source:...
1836
1836
SLC26A2
solute carrier family 26 member 2 [Source:H...
2317
2317
FLNB
filamin B [Source:HGNC Symbol;Acc:HGNC:3755]
29940
29940
DSE
dermatan sulfate epimerase [Source:HGNC Sym...
3339
3339
HSPG2
heparan sulfate proteoglycan 2 [Source:HGNC...
415
415
ARSL
arylsulfatase L [Source:HGNC Symbol;Acc:HGN...
64412
64412
GZF1
GDNF inducible zinc finger protein 1 [Sourc...
6662
6662
SOX9
SRY-box transcription factor 9 [Source:HGNC...
Version history
2024.1.Hs: Updated to HPO Release 2024-04-26.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.