Human Gene Set: HE_LIM_SUN_FETAL_LUNG_C1_MID_BASAL_CELL


Standard name HE_LIM_SUN_FETAL_LUNG_C1_MID_BASAL_CELL
Systematic name M45703
Brief description Mid basal
Full description or abstract  
Collection C8: Cell Type Signature
Source publication Pubmed 36493756   Authors: He P,Lim K,Sun D,Pett JP,Jeng Q,Polanski K,Dong Z,Bolt L,Richardson L,Mamanova L,Dabrowska M,Wilbrey-Clark A,Madissoon E,Tuong ZK,Dann E,Suo C,Goh I,Yoshida M,Nikoli? MZ,Janes SM,He X,Barker RA,Teichmann SA,Marioni JC,Meyer KB,Rawlins EL
Exact source Table S1. Cell-type markers, related to Figures 2, 4, 7, and S1. Sheet C1 Annotated Cell: Mid basal
Related gene sets (show 125 additional gene sets from the source publication)

(show 39 gene sets from the same authors)
External links https://lungcellatlas.org
Filtered by similarity ?
Source species Homo sapiens
Contributed by Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 149 genes
Gene families ? Categorize these 149 genes by gene family
Show members (show 151 source identifiers mapped to 149 genes)
Version history 2023.1.Hs: First Introduced.

See MSigDB license terms here. Please note that certain gene sets have special access terms.