Human Gene Set: HDAC8_TARGET_GENES


Standard name HDAC8_TARGET_GENES
Systematic name M40834
Brief description Genes containing one or more binding sites for UniProt:Q9BY41 (HDAC8) in their promoter regions (TSS -1000,+100 bp) as identified by GTRD version 20.06 ChIP-seq harmonization.
Full description or abstract  
Collection C3: Regulatory Target
      TFT: Transcription Factor Targets
            TFT:GTRD: GTRD
Source publication Pubmed 30445619   Authors: Yevshin I,Sharipov R,Kolmykov S,Kondrakhin Y,Kolpakov F
Exact source Q9BY41
Related gene sets (show 504 additional gene sets from the source publication)
External links http://gtrd.biouml.org/
Filtered by similarity ?
Source species Homo sapiens
Contributed by Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace		 Human_Ensembl_Gene_ID
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 170 genes
Gene families ? Categorize these 170 genes by gene family
Show members (show 182 source identifiers mapped to 170 genes)
Version history 2023.1.Hs: Updated to GTRD v21.12

See MSigDB license terms here. Please note that certain gene sets have special access terms.