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Human Gene Set: GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_DN
Standard name
GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_DN
Systematic name
M10013
Brief description
Genes down-regulated naïve CD4
[GeneID=920]
T cells: Ly6c+ versus Ly6c-.
Full description or abstract
The naive CD4 T cell compartment is heterogeneous. Ly-6C- and Ly-6C+ Naive CD4 T cells were compare by microarrays.
Collection
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
Source publication
Exact source
GSE37336_3672_200_DN
Related gene sets
External links
Filtered by similarity
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Source species
Mus musculus
Contributed by
Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace
HUMAN_GENE_SYMBOL
Dataset references
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show
1 datasets)
GSE37336
Download gene set
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TSV metadata
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 192 genes
Gene families
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Categorize
these 192 genes by gene family
Show members
(
show
200 source identifiers mapped to 192 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
AACSP1
729522
AACSP1
acetoacetyl-CoA synthetase...
AARS
16
AARS1
alanyl-tRNA synthetase 1 [...
ABCA8
10351
ABCA8
ATP binding cassette subfa...
ABCB11
8647
ABCB11
ATP binding cassette subfa...
ACSBG1
23205
ACSBG1
acyl-CoA synthetase bubble...
ACSL6
23305
ACSL6
acyl-CoA synthetase long c...
ADAMTS9
56999
ADAMTS9
ADAM metallopeptidase with...
ADCY2
108
ADCY2
adenylate cyclase 2 [Sourc...
ADCY8
114
ADCY8
adenylate cyclase 8 [Sourc...
ADSSL1
122622
ADSS1
adenylosuccinate synthase ...
AFF2
2334
AFF2
ALF transcription elongati...
ANO7L1
101927546
ANO7L1
anoctamin 7 like 1 (pseudo...
B4GALT4
8702
B4GALT4
beta-1,4-galactosyltransfe...
BAHCC1
57597
BAHCC1
BAH domain and coiled-coil...
BMP5
653
BMP5
bone morphogenetic protein...
BTBD10
84280
BTBD10
BTB domain containing 10 [...
C12orf59
120939
TMEM52B
transmembrane protein 52B ...
C16orf57
79650
USB1
U6 snRNA biogenesis phosph...
C1orf173
127254
ERICH3
glutamate rich 3 [Source:H...
C1orf201
90529
STPG1
sperm tail PG-rich repeat ...
C21orf71
C2orf71
388939
PCARE
photoreceptor cilium actin...
C6orf1
221491
SMIM29
small integral membrane pr...
C6orf123
26238
LINC01558
long intergenic non-protei...
C9orf47
1903
S1PR3
sphingosine-1-phosphate re...
C9orf79
286234
SPATA31E1
SPATA31 subfamily E member...
CADM4
199731
CADM4
cell adhesion molecule 4 [...
CASP4
837
CASP4
caspase 4 [Source:HGNC Sym...
CCDC114
93233
ODAD1
outer dynein arm docking c...
CCDC115
84317
CCDC115
coiled-coil domain contain...
CCDC154
645811
CCDC154
coiled-coil domain contain...
CCDC64B
146439
BICDL2
BICD family like cargo ada...
CCDC9
26093
CCDC9
coiled-coil domain contain...
CCK
885
CCK
cholecystokinin [Source:HG...
CD247
919
CD247
CD247 molecule [Source:HGN...
CD99P1
401577
CD99P1
CD99 molecule pseudogene 1...
CDX2
1045
CDX2
caudal type homeobox 2 [So...
CEACAM19
56971
CEACAM19
CEA cell adhesion molecule...
CHI3L2
1117
CHI3L2
chitinase 3 like 2 [Source...
CHST4
10164
CHST4
carbohydrate sulfotransfer...
CIB2
10518
CIB2
calcium and integrin bindi...
CLDN20
49861
CLDN20
claudin 20 [Source:HGNC Sy...
CLDN4
1364
CLDN4
claudin 4 [Source:HGNC Sym...
CLEC14A
161198
CLEC14A
C-type lectin domain conta...
CLEC4F
165530
CLEC4F
C-type lectin domain famil...
CPT1C
126129
CPT1C
carnitine palmitoyltransfe...
CRISP3
10321
CRISP3
cysteine rich secretory pr...
CRISPLD2
83716
CRISPLD2
cysteine rich secretory pr...
CROCCP3
114819
CROCCP3
CROCC pseudogene 3 [Source...
CTSF
8722
CTSF
cathepsin F [Source:HGNC S...
CYP27C1
339761
CYP27C1
cytochrome P450 family 27 ...
CYSLTR1
10800
CYSLTR1
cysteinyl leukotriene rece...
DKFZP434K028
26070
MYRF-AS1
MYRF antisense RNA 1 [Sour...
DNAH12
201625
DNAH12
dynein axonemal heavy chai...
DSC1
1823
DSC1
desmocollin 1 [Source:HGNC...
DTX4
23220
DTX4
deltex E3 ubiquitin ligase...
DYDC2
84332
DYDC2
DPY30 domain containing 2 ...
ECM1
1893
ECM1
extracellular matrix prote...
EIF4EBP1
1978
EIF4EBP1
eukaryotic translation ini...
ENG
2022
ENG
endoglin [Source:HGNC Symb...
ERG
2078
ERG
ETS transcription factor E...
FAM26D
221301
CALHM4
calcium homeostasis modula...
FAM55D
54827
NXPE4
neurexophilin and PC-ester...
FBXL19
54620
FBXL19
F-box and leucine rich rep...
FBXO36
130888
FBXO36
F-box protein 36 [Source:H...
FCHO1
23149
FCHO1
FCH and mu domain containi...
FCRL2
79368
FCRL2
Fc receptor like 2 [Source...
FGL2
10875
FGL2
fibrinogen like 2 [Source:...
FLJ27354
400761
LRRC8C-DT
LRRC8C divergent transcrip...
FLJ31356
403150
FOSL2-AS1
FOSL2 antisense RNA 1 [Sou...
FMO2
2327
FMO2
flavin containing dimethyl...
FOLR2
2350
FOLR2
folate receptor beta [Sour...
FRMPD1
22844
FRMPD1
FERM and PDZ domain contai...
FSD2
123722
FSD2
fibronectin type III and S...
GNA15
2769
GNA15
G protein subunit alpha 15...
GRK5
2869
GRK5
G protein-coupled receptor...
HAS2
3037
HAS2
hyaluronan synthase 2 [Sou...
HCP5P10
352990
HCP5B
HLA complex P5B [Source:HG...
HDAC10
83933
HDAC10
histone deacetylase 10 [So...
HDAC11
79885
HDAC11
histone deacetylase 11 [So...
HEMGN
55363
HEMGN
hemogen [Source:HGNC Symbo...
HPSE2
60495
HPSE2
heparanase 2 (inactive) [S...
HSPB7
27129
HSPB7
heat shock protein family ...
HSPC081
IHH
3549
IHH
Indian hedgehog signaling ...
IL11
3589
IL11
interleukin 11 [Source:HGN...
IL5RA
3568
IL5RA
interleukin 5 receptor sub...
IQSEC2
23096
IQSEC2
IQ motif and Sec7 domain A...
IRF5
3663
IRF5
interferon regulatory fact...
ITGAD
3681
ITGAD
integrin subunit alpha D [...
KCNA1
3736
KCNA1
potassium voltage-gated ch...
KCNS1
3787
KCNS1
potassium voltage-gated ch...
KCTD21
283219
KCTD21
potassium channel tetramer...
KIF6
221458
KIF6
kinesin family member 6 [S...
KIR2DS5
3810
KIR2DS5
killer cell immunoglobulin...
KLRB1
3820
KLRB1
killer cell lectin like re...
KRT14
3861
KRT14
keratin 14 [Source:HGNC Sy...
KRT82
3888
KRT82
keratin 82 [Source:HGNC Sy...
KRTAP4-8
728224
KRTAP4-8
keratin associated protein...
LOC100133319
100133319
PRO1804
uncharacterized LOC1001333...
LOC100144597
100144597
LINC01056
long intergenic non-protei...
LOC100271840
LOC100287366
100287366
OSTM1-AS1
OSTM1 antisense RNA 1 [Sou...
LOC100287407
LOC100287421
LOC100288432
100288432
IL10RB-DT
IL10RB divergent transcrip...
LOC100294335
474170
LRRC37A2
leucine rich repeat contai...
LOC100506089
LOC100506436
100506436
SPAG5-AS1
SPAG5 antisense RNA 1 [Sou...
LOC283585
283585
LINC01148
long intergenic non-protei...
LOC286149
105375650
MIR3150BHG
MIR3150B host gene [Source...
LOC389043
389043
LINC01120
long intergenic non-protei...
LOC400680
400680
LINC00664
long intergenic non-protei...
LOC400748
400748
ENSG00000235143
novel transcript
LOC439914
100996455
LINC02724
long intergenic non-protei...
LOC642620
LOC643733
643733
CASP4LP
caspase 4 like, pseudogene...
LOC644135
644135
PDE7B-AS1
PDE7B antisense RNA 1 [Sou...
LOC644192
644192
NR2F2-AS1
NR2F2 antisense RNA 1 [Sou...
LOC652276
652276
ENSG00000291228
novel transcript
LOC728537
728537
C2orf92
chromosome 2 open reading ...
LOC728723
728723
ZBED3-AS1
ZBED3 antisense RNA 1 [Sou...
LOC728804
LOC729059
729059
TEX46
testis expressed 46 [Sourc...
LY6G6C
80740
LY6G6C
lymphocyte antigen 6 famil...
MAGEA5
4104
MAGEA5P
MAGE family member A5, pse...
MATN1
4146
MATN1
matrilin 1 [Source:HGNC Sy...
MC5R
4161
MC5R
melanocortin 5 receptor [S...
MEPE
56955
MEPE
matrix extracellular phosp...
MGC23284
197187
SNAI3-AS1
SNAI3 antisense RNA 1 [Sou...
MMD2
221938
MMD2
monocyte to macrophage dif...
MSMB
4477
MSMB
microseminoprotein beta [S...
MUC19
283463
MUC19
mucin 19, oligomeric [Sour...
NAV2-AS4
399876
NAV2-AS4
NAV2 antisense RNA 4 [Sour...
NCKAP5L
57701
NCKAP5L
NCK associated protein 5 l...
NCRNA00247
404201
WDFY3-AS2
WDFY3 antisense RNA 2 [Sou...
NCRNA00334
114042
LINC00334
long intergenic non-protei...
NEDD9
4739
NEDD9
neural precursor cell expr...
NEU4
129807
NEU4
neuraminidase 4 [Source:HG...
NLRC4
58484
NLRC4
NLR family CARD domain con...
NPAS3
64067
NPAS3
neuronal PAS domain protei...
NRXN1
9378
NRXN1
neurexin 1 [Source:HGNC Sy...
ONECUT2
9480
ONECUT2
one cut homeobox 2 [Source...
OR1A1
8383
OR1A1
olfactory receptor family ...
OR1A2
26189
OR1A2
olfactory receptor family ...
OR2C1
4993
OR2C1
olfactory receptor family ...
OR52A1
23538
OR52A1
olfactory receptor family ...
OR7E104P
81137
OR7E104P
olfactory receptor family ...
PCDHGC5
56097
PCDHGC5
protocadherin gamma subfam...
PI3
5266
PI3
peptidase inhibitor 3 [Sou...
PKP1
5317
PKP1
plakophilin 1 [Source:HGNC...
PLA1A
51365
PLA1A
phospholipase A1 member A ...
PNLDC1
154197
PNLDC1
PARN like ribonuclease dom...
PPP4R1L
55370
PPP4R1L
protein phosphatase 4 regu...
PRSS33
260429
PRSS33
serine protease 33 [Source...
PTTG2
10744
PTTG2
pituitary tumor-transformi...
RAET1E
135250
RAET1E
retinoic acid early transc...
RDH12
145226
RDH12
retinol dehydrogenase 12 [...
RHOJ
57381
RHOJ
ras homolog family member ...
RNF207
388591
RNF207
ring finger protein 207 [S...
SERPINB9
5272
SERPINB9
serpin family B member 9 [...
SHROOM1
134549
SHROOM1
shroom family member 1 [So...
SLC16A7
9194
SLC16A7
solute carrier family 16 m...
SLC22A12
116085
SLC22A12
solute carrier family 22 m...
SMR3B
10879
SMR3B
submaxillary gland androge...
SOX14
8403
SOX14
SRY-box transcription fact...
SPP1
6696
SPP1
secreted phosphoprotein 1 ...
SPRR2C
6702
SPRR2C
small proline rich protein...
SRRM5
100170229
SRRM5
serine/arginine repetitive...
SSTR3
6753
SSTR3
somatostatin receptor 3 [S...
ST6GALNAC5
81849
ST6GALNAC5
ST6 N-acetylgalactosaminid...
SYT13
57586
SYT13
synaptotagmin 13 [Source:H...
TACR2
6865
TACR2
tachykinin receptor 2 [Sou...
TARP
445347
TARP
TCR gamma alternate readin...
TCEB3C
162699
ELOA3P
elongin A3, pseudogene [So...
TCP11L1
55346
TCP11L1
t-complex 11 like 1 [Sourc...
TEX11
56159
TEX11
testis expressed 11 [Sourc...
TINAGL1
64129
TINAGL1
tubulointerstitial nephrit...
TMEM176A
55365
TMEM176A
transmembrane protein 176A...
TMPRSS13
84000
TMPRSS13
transmembrane serine prote...
TP73
7161
TP73
tumor protein p73 [Source:...
TPPP2
122664
TPPP2
tubulin polymerization pro...
TRIM16L
147166
TRIM16L
tripartite motif containin...
TTLL9
164395
TTLL9
tubulin tyrosine ligase li...
UNC13C
440279
UNC13C
unc-13 homolog C [Source:H...
UNC5A
90249
UNC5A
unc-5 netrin receptor A [S...
VPREB3
29802
VPREB3
V-set pre-B cell surrogate...
VWA1
64856
VWA1
von Willebrand factor A do...
WDR93
56964
WDR93
WD repeat domain 93 [Sourc...
WFDC9
259240
WFDC9
WAP four-disulfide core do...
WIPF1
7456
WIPF1
WAS/WASL interacting prote...
WNT1
7471
WNT1
Wnt family member 1 [Sourc...
WNT2B
7482
WNT2B
Wnt family member 2B [Sour...
XCR1
2829
XCR1
X-C motif chemokine recept...
XYLB
9942
XYLB
xylulokinase [Source:HGNC ...
ZNF488
118738
ZNF488
zinc finger protein 488 [S...
ZNF497
162968
ZNF497
zinc finger protein 497 [S...
ZNF641
121274
ZNF641
zinc finger protein 641 [S...
ZNF671
79891
ZNF671
zinc finger protein 671 [S...
ZNF710
374655
ZNF710
zinc finger protein 710 [S...
Version history
7.3: Moved to ImmuneSigDB sub-collection.
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