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Human Gene Set: GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_CD4_TCELL_UP
Standard name
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_CD4_TCELL_UP
Systematic name
M8868
Brief description
Genes up-regulated in common lymphoid progenitors versus CD4
[GeneID=920]
T cells.
Full description or abstract
Expression profiling of Rag2-deficient Ets1++ and Rag2-deficient Ets1-- mature NK cells and WT bone marrow progenitors, WT T cells, and WT Pro B cells
Collection
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
Source publication
Pubmed 22608498
Authors: Ramirez K,Chandler KJ,Spaulding C,Zandi S,Sigvardsson M,Graves BJ,Kee BL
Exact source
GSE37301_2611_200_UP
Related gene sets
(
show
57 additional gene sets from the source publication)
GSE37301_CD4_TCELL_VS_GRANULOCYTE_MONOCYTE_PROGENITOR_DN
GSE37301_CD4_TCELL_VS_GRANULOCYTE_MONOCYTE_PROGENITOR_UP
GSE37301_CD4_TCELL_VS_RAG2_KO_NK_CELL_DN
GSE37301_CD4_TCELL_VS_RAG2_KO_NK_CELL_UP
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_CD4_TCELL_DN
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_GRAN_MONO_PROGENITOR_DN
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_GRAN_MONO_PROGENITOR_UP
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_PRO_BCELL_DN
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_PRO_BCELL_UP
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_RAG2_KO_NK_CELL_DN
GSE37301_COMMON_LYMPHOID_PROGENITOR_VS_RAG2_KO_NK_CELL_UP
GSE37301_GRANULOCYTE_MONOCYTE_PROGENITOR_VS_RAG2_KO_NK_CELL_DN
GSE37301_GRANULOCYTE_MONOCYTE_PROGENITOR_VS_RAG2_KO_NK_CELL_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_CD4_TCELL_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_CD4_TCELL_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_COMMON_LYMPHOID_PROGENITOR_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_COMMON_LYMPHOID_PROGENITOR_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_GRAN_MONO_PROGENITOR_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_GRAN_MONO_PROGENITOR_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_LYMPHOID_PRIMED_MPP_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_LYMPHOID_PRIMED_MPP_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_MULTIPOTENT_PROGENITOR_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_MULTIPOTENT_PROGENITOR_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_PRO_BCELL_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_PRO_BCELL_UP
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_RAG2_KO_NK_CELL_DN
GSE37301_HEMATOPOIETIC_STEM_CELL_VS_RAG2_KO_NK_CELL_UP
GSE37301_LYMPHOID_PRIMED_MPP_VS_CD4_TCELL_DN
GSE37301_LYMPHOID_PRIMED_MPP_VS_CD4_TCELL_UP
GSE37301_LYMPHOID_PRIMED_MPP_VS_COMMON_LYMPHOID_PROGENITOR_DN
GSE37301_LYMPHOID_PRIMED_MPP_VS_COMMON_LYMPHOID_PROGENITOR_UP
GSE37301_LYMPHOID_PRIMED_MPP_VS_GRAN_MONO_PROGENITOR_DN
GSE37301_LYMPHOID_PRIMED_MPP_VS_GRAN_MONO_PROGENITOR_UP
GSE37301_LYMPHOID_PRIMED_MPP_VS_PRO_BCELL_DN
GSE37301_LYMPHOID_PRIMED_MPP_VS_PRO_BCELL_UP
GSE37301_LYMPHOID_PRIMED_MPP_VS_RAG2_KO_NK_CELL_DN
GSE37301_LYMPHOID_PRIMED_MPP_VS_RAG2_KO_NK_CELL_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_CD4_TCELL_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_CD4_TCELL_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_COMMON_LYMPHOID_PROGENITOR_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_COMMON_LYMPHOID_PROGENITOR_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_GRAN_MONO_PROGENITOR_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_GRAN_MONO_PROGENITOR_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_LYMPHOID_PRIMED_MPP_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_LYMPHOID_PRIMED_MPP_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_PRO_BCELL_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_PRO_BCELL_UP
GSE37301_MULTIPOTENT_PROGENITOR_VS_RAG2_KO_NK_CELL_DN
GSE37301_MULTIPOTENT_PROGENITOR_VS_RAG2_KO_NK_CELL_UP
GSE37301_PRO_BCELL_VS_CD4_TCELL_DN
GSE37301_PRO_BCELL_VS_CD4_TCELL_UP
GSE37301_PRO_BCELL_VS_GRANULOCYTE_MONOCYTE_PROGENITOR_DN
GSE37301_PRO_BCELL_VS_GRANULOCYTE_MONOCYTE_PROGENITOR_UP
GSE37301_PRO_BCELL_VS_RAG2_KO_NK_CELL_DN
GSE37301_PRO_BCELL_VS_RAG2_KO_NK_CELL_UP
GSE37301_RAG2_KO_VS_RAG2_AND_ETS1_KO_NK_CELL_DN
GSE37301_RAG2_KO_VS_RAG2_AND_ETS1_KO_NK_CELL_UP
(
show
2 gene sets from the same authors)
VILIMAS_NOTCH1_TARGETS_DN
VILIMAS_NOTCH1_TARGETS_UP
External links
Filtered by similarity
?
Source species
Mus musculus
Contributed by
Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace
HUMAN_GENE_SYMBOL
Dataset references
(
show
1 datasets)
GSE37301
Download gene set
format:
grp
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TSV metadata
Compute overlaps
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H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
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NG-CHM interactive heatmaps
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Please note that clustering takes a few seconds
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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Show members
(
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200 source identifiers mapped to 200 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
ABCE1
6059
ABCE1
ATP binding cassette subfa...
ACBD3
64746
ACBD3
acyl-CoA binding domain co...
ACSL1
2180
ACSL1
acyl-CoA synthetase long c...
ADRB3
155
ADRB3
adrenoceptor beta 3 [Sourc...
AGFG1
3267
AGFG1
ArfGAP with FG repeats 1 [...
AHCYL1
10768
AHCYL1
adenosylhomocysteinase lik...
AKAP17A
8227
AKAP17A
A-kinase anchoring protein...
AKAP8
10270
AKAP8
A-kinase anchoring protein...
ALG3
10195
ALG3
ALG3 alpha-1,3- mannosyltr...
AMIGO2
347902
AMIGO2
adhesion molecule with Ig ...
ANP32C
23520
ANP32CP
acidic nuclear phosphoprot...
ARF4
378
ARF4
ADP ribosylation factor 4 ...
ATP8B2
57198
ATP8B2
ATPase phospholipid transp...
BCLAF1
9774
BCLAF1
BCL2 associated transcript...
BET1L
51272
BET1L
Bet1 golgi vesicular membr...
BTG2
7832
BTG2
BTG anti-proliferation fac...
C12orf24
29902
FAM216A
family with sequence simil...
C16orf3
750
GAS8-AS1
GAS8 antisense RNA 1 [Sour...
C5AR1
728
C5AR1
complement C5a receptor 1 ...
C7orf68
29923
HILPDA
hypoxia inducible lipid dr...
CADM4
199731
CADM4
cell adhesion molecule 4 [...
CCDC103
388389
CCDC103
coiled-coil domain contain...
CCL1
6346
CCL1
C-C motif chemokine ligand...
CCL22
6367
CCL22
C-C motif chemokine ligand...
CCND1
595
CCND1
cyclin D1 [Source:HGNC Sym...
CCNT2
905
CCNT2
cyclin T2 [Source:HGNC Sym...
CCT4
10575
CCT4
chaperonin containing TCP1...
CD44
960
CD44
CD44 molecule (Indian bloo...
CD82
3732
CD82
CD82 molecule [Source:HGNC...
CD97
976
ADGRE5
adhesion G protein-coupled...
CDH7
1005
CDH7
cadherin 7 [Source:HGNC Sy...
CEBPG
1054
CEBPG
CCAAT enhancer binding pro...
CHML
1122
CHML
CHM like Rab escort protei...
CLCN7
1186
CLCN7
chloride voltage-gated cha...
CMAHP
8418
CMAHP
cytidine monophospho-N-ace...
COQ10B
80219
COQ10B
coenzyme Q10B [Source:HGNC...
CRYM
1428
CRYM
crystallin mu [Source:HGNC...
CTNNAL1
8727
CTNNAL1
catenin alpha like 1 [Sour...
CUBN
8029
CUBN
cubilin [Source:HGNC Symbo...
DCLK2
166614
DCLK2
doublecortin like kinase 2...
DDX10
1662
DDX10
DEAD-box helicase 10 [Sour...
DDX21
9188
DDX21
DExD-box helicase 21 [Sour...
DDX51
317781
DDX51
DEAD-box helicase 51 [Sour...
DDX54
79039
DDX54
DEAD-box helicase 54 [Sour...
DLX2
1746
DLX2
distal-less homeobox 2 [So...
DNAJB9
4189
DNAJB9
DnaJ heat shock protein fa...
DNPEP
23549
DNPEP
aspartyl aminopeptidase [S...
DOHH
83475
DOHH
deoxyhypusine hydroxylase ...
DPH2
1802
DPH2
diphthamide biosynthesis 2...
DSTYK
25778
DSTYK
dual serine/threonine and ...
E2F4
1874
E2F4
E2F transcription factor 4...
EIF3J
8669
EIF3J
eukaryotic translation ini...
EIF5B
9669
EIF5B
eukaryotic translation ini...
ETNK2
55224
ETNK2
ethanolamine kinase 2 [Sou...
EVC
2121
EVC
EvC ciliary complex subuni...
EXOSC4
54512
EXOSC4
exosome component 4 [Sourc...
EZR
7430
EZR
ezrin [Source:HGNC Symbol;...
FAM129A
116496
NIBAN1
niban apoptosis regulator ...
FAM131A
131408
FAM131A
family with sequence simil...
FAM18B1
51030
TVP23B
trans-golgi network vesicl...
FAM46A
55603
TENT5A
terminal nucleotidyltransf...
FBL
2091
FBL
fibrillarin [Source:HGNC S...
FKSG2
59347
TPT1P8
TPT1 pseudogene 8 [Source:...
FNBP1
23048
FNBP1
formin binding protein 1 [...
FUT5
2527
FUT5
fucosyltransferase 5 [Sour...
GABRG3
2567
GABRG3
gamma-aminobutyric acid ty...
GFOD2
81577
GFOD2
Gfo/Idh/MocA-like oxidored...
GK3P
2713
GK3
glycerol kinase 3 [Source:...
GLRX5
51218
GLRX5
glutaredoxin 5 [Source:HGN...
GOSR1
9527
GOSR1
golgi SNAP receptor comple...
HBXIP
10542
LAMTOR5
late endosomal/lysosomal a...
HIST1H3F
8968
H3C7
H3 clustered histone 7 [So...
ICAM1
3383
ICAM1
intercellular adhesion mol...
IFNG
3458
IFNG
interferon gamma [Source:H...
IL17A
3605
IL17A
interleukin 17A [Source:HG...
IL17RC
84818
IL17RC
interleukin 17 receptor C ...
IL2RA
3559
IL2RA
interleukin 2 receptor sub...
INHBA
3624
INHBA
inhibin subunit beta A [So...
IRF4
3662
IRF4
interferon regulatory fact...
ITGB1BP2
26548
ITGB1BP2
integrin subunit beta 1 bi...
JUNB
3726
JUNB
JunB proto-oncogene, AP-1 ...
KIAA0664
23277
CLUH
clustered mitochondria hom...
KLF10
7071
KLF10
KLF transcription factor 1...
KLHL18
23276
KLHL18
kelch like family member 1...
KLHL21
9903
KLHL21
kelch like family member 2...
LGI2
55203
LGI2
leucine rich repeat LGI fa...
LINS
55180
LINS1
lines homolog 1 [Source:HG...
LOC100130331
100130331
ENSG00000237250
novel transcript
LRRC15
131578
LRRC15
leucine rich repeat contai...
LRRFIP1
9208
LRRFIP1
LRR binding FLII interacti...
LRRK1
79705
LRRK1
leucine rich repeat kinase...
MAFF
23764
MAFF
MAF bZIP transcription fac...
MAPRE2
10982
MAPRE2
microtubule associated pro...
MEIS3P1
4213
MEIS3P1
Meis homeobox 3 pseudogene...
METTL13
51603
METTL13
methyltransferase 13, eEF1...
MINA
84864
RIOX2
ribosomal oxygenase 2 [Sou...
MRPS22
56945
MRPS22
mitochondrial ribosomal pr...
MTERFD1
51001
MTERF3
mitochondrial transcriptio...
MTRR
4552
MTRR
5-methyltetrahydrofolate-h...
NDST1
3340
NDST1
N-deacetylase and N-sulfot...
NDUFAB1
4706
NDUFAB1
NADH:ubiquinone oxidoreduc...
NFAT5
10725
NFAT5
nuclear factor of activate...
NFATC1
4772
NFATC1
nuclear factor of activate...
NFIL3
4783
NFIL3
nuclear factor, interleuki...
NFKBIB
4793
NFKBIB
NFKB inhibitor beta [Sourc...
NIP7
51388
NIP7
nucleolar pre-rRNA process...
NPHS1
4868
NPHS1
NPHS1 adhesion molecule, n...
NT5DC3
51559
NT5DC3
5'-nucleotidase domain con...
NUP88
4927
NUP88
nucleoporin 88 [Source:HGN...
OPCML
4978
OPCML
opioid binding protein/cel...
OR1F2P
26184
OR1F2P
olfactory receptor family ...
PAICS
10606
PAICS
phosphoribosylaminoimidazo...
PCGF1
84759
PCGF1
polycomb group ring finger...
PCID2
55795
PCID2
PCI domain containing 2 [S...
PDCD11
22984
PDCD11
programmed cell death 11 [...
PDHA1
5160
PDHA1
pyruvate dehydrogenase E1 ...
PDIA5
10954
PDIA5
protein disulfide isomeras...
PGAM1
5223
PGAM1
phosphoglycerate mutase 1 ...
PHB
5245
PHB1
prohibitin 1 [Source:HGNC ...
PITX1
5307
PITX1
paired like homeodomain 1 ...
PLAGL2
5326
PLAGL2
PLAG1 like zinc finger 2 [...
PNPO
55163
PNPO
pyridoxamine 5'-phosphate ...
PPA1
5464
PPA1
inorganic pyrophosphatase ...
PPFIA1
8500
PPFIA1
PTPRF interacting protein ...
PPP1R2
5504
PPP1R2
protein phosphatase 1 regu...
PPPDE2
27351
DESI1
desumoylating isopeptidase...
PRNP
5621
PRNP
prion protein [Source:HGNC...
PRR3
80742
PRR3
proline rich 3 [Source:HGN...
PRY
9081
PRY
PTPN13 like Y-linked [Sour...
PSME3
10197
PSME3
proteasome activator subun...
PSME4
23198
PSME4
proteasome activator subun...
PTRH2
51651
PTRH2
peptidyl-tRNA hydrolase 2 ...
RAB1A
5861
RAB1A
RAB1A, member RAS oncogene...
RAI2
10742
RAI2
retinoic acid induced 2 [S...
RAN
5901
RAN
RAN, member RAS oncogene f...
RANBP2
5903
RANBP2
RAN binding protein 2 [Sou...
RASIP1
54922
RASIP1
Ras interacting protein 1 ...
RBM8A
9939
RBM8A
RNA binding motif protein ...
RCAN1
1827
RCAN1
regulator of calcineurin 1...
RDBP
7936
NELFE
negative elongation factor...
RFK
55312
RFK
riboflavin kinase [Source:...
RGS1
5996
RGS1
regulator of G protein sig...
RIN3
79890
RIN3
Ras and Rab interactor 3 [...
RPL22
6146
RPL22
ribosomal protein L22 [Sou...
RPL4
6124
RPL4
ribosomal protein L4 [Sour...
RPS7
6201
RPS7
ribosomal protein S7 [Sour...
RRAD
6236
RRAD
RRAD, Ras related glycolys...
SDCBP
6386
SDCBP
syndecan binding protein [...
SEC14L4
284904
SEC14L4
SEC14 like lipid binding 4...
SEC62
7095
SEC62
SEC62 homolog, preprotein ...
SERINC5
256987
SERINC5
serine incorporator 5 [Sou...
SFPQ
6421
SFPQ
splicing factor proline an...
SGK1
6446
SGK1
serum/glucocorticoid regul...
SLA
6503
SLA
Src like adaptor [Source:H...
SLC12A8
84561
SLC12A8
solute carrier family 12 m...
SLC25A44
9673
SLC25A44
solute carrier family 25 m...
SLC25A6
293
SLC25A6
solute carrier family 25 m...
SLC30A6
55676
SLC30A6
solute carrier family 30 m...
SLC6A8
6535
SLC6A8
solute carrier family 6 me...
SMNDC1
10285
SMNDC1
survival motor neuron doma...
SMS
6611
SMS
spermine synthase [Source:...
SNRPD1
6632
SNRPD1
small nuclear ribonucleopr...
SPRY4
81848
SPRY4
sprouty RTK signaling anta...
SRM
6723
SRM
spermidine synthase [Sourc...
SSX7
280658
SSX7
SSX family member 7 [Sourc...
SYNCRIP
10492
SYNCRIP
synaptotagmin binding cyto...
TAF9
6880
TAF9
TATA-box binding protein a...
TBL3
10607
TBL3
transducin beta like 3 [So...
TDP1
55775
TDP1
tyrosyl-DNA phosphodiester...
TGFBR2
7048
TGFBR2
transforming growth factor...
TGIF2
60436
TGIF2
TGFB induced factor homeob...
TGS1
96764
TGS1
trimethylguanosine synthas...
TIMM8A
1678
TIMM8A
translocase of inner mitoc...
TM4SF4
7104
TM4SF4
transmembrane 4 L six fami...
TNIP3
79931
TNIP3
TNFAIP3 interacting protei...
TOMM70A
9868
TOMM70
translocase of outer mitoc...
TSNAXIP1
55815
TSNAXIP1
translin associated factor...
TTC33
23548
TTC33
tetratricopeptide repeat d...
TUFT1
7286
TUFT1
tuftelin 1 [Source:HGNC Sy...
TWISTNB
221830
POLR1F
RNA polymerase I subunit F...
UBE2N
7334
UBE2N
ubiquitin conjugating enzy...
UFM1
51569
UFM1
ubiquitin fold modifier 1 ...
UHRF1BP1L
23074
BLTP3B
bridge-like lipid transfer...
ULBP2
80328
ULBP2
UL16 binding protein 2 [So...
UMPS
7372
UMPS
uridine monophosphate synt...
UPF1
5976
UPF1
UPF1 RNA helicase and ATPa...
URB1
9875
URB1
URB1 ribosome biogenesis h...
UTP11L
51118
UTP11
UTP11 small subunit proces...
UTP14A
10813
UTP14A
UTP14A small subunit proce...
UXS1
80146
UXS1
UDP-glucuronate decarboxyl...
VAMP1
6843
VAMP1
vesicle associated membran...
VCL
7414
VCL
vinculin [Source:HGNC Symb...
VEGFA
7422
VEGFA
vascular endothelial growt...
WDR4
10785
WDR4
WD repeat domain 4 [Source...
WDR60
55112
DYNC2I1
dynein 2 intermediate chai...
WNT16
51384
WNT16
Wnt family member 16 [Sour...
ZFP36L1
677
ZFP36L1
ZFP36 ring finger protein ...
ZFR
51663
ZFR
zinc finger RNA binding pr...
ZNF280A
129025
ZNF280A
zinc finger protein 280A [...
ZNF324
25799
ZNF324
zinc finger protein 324 [S...
Version history
7.3: Moved to ImmuneSigDB sub-collection.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.